| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8152 |
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| Symbol | potB |
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| ID | 7365066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 104805 |
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| End bp | 105662 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641768 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002540065 |
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| Protein GI | 222080202 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATC GGCGGCAGGA ACTGGTCACA CTCTTTTTGC TGGCGCCTTC GCTCGTCATG
TCAGTGCTAT TACTTGTGGT GCCGCTGCTG GTGGTGATTG CCTATAGCTT TGCTGGCCGG
GATGCCTATG GCGGCGCTGT CACCGGCTTT ACCCTCGCAA GCTATATCGA ACTACTTCAG
CCAACTTATC TGCCGATCTT CGTAAACTCG TTGCAGATTG CGGCGGTATC GACCGCTGTT
TGCCTTCTTA TCGGCTATCC GATCGCCTAC TTCATAGCAT TTCGTGCTGG TAGGCATGCC
GGGCTCCTGC TCGCACTGCT GCTCATCCCG TTCTGGATCG ACTTCATGAT CCGCATGTCG
AGCTGGATGG TCCTGATGGG TCGGAACGGC ACGATCAACG GAATTCTGAG CGGCATCGGG
ATGATCGATG AGCCAATCAG GATGATCGGT ACCTATCCGG CGGTGACGGT TGGCATGCTC
TACGCGTTTC TGCCGACGAC TGTGCTGCCG ATCTACGCCG CGCTTTCCGG CATCAACAAG
CGTCTGCTTG AGGCTGCGGA CGATCTCGGC GCCGGGCCGA TCGAGGCTTT TTGGCGGGTA
ACCTTTCCGC TTTCTCTCCC AGGCGTGATG GCGGCGATGC TCTTCGTCTT CGTGCCGGCT
ATGGGCGTCT ATGCGATTCC CGTTCTCCTC GGCGGTGGCA AGAGCATTAT TCTCGGCAAT
CTGATCGTCC AGCTCTTCCT GGATTTCCGC AATATTCCCC TGGGGGCCGC AGTTTCGGTC
GTCATGCTCG TGGTGTCTTC GGTCATCATC GTTTTCTATA TGCGCATTCT GCGCAGGGTC
GAGGAGGCGC ACGCATGA
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| Protein sequence | MLNRRQELVT LFLLAPSLVM SVLLLVVPLL VVIAYSFAGR DAYGGAVTGF TLASYIELLQ
PTYLPIFVNS LQIAAVSTAV CLLIGYPIAY FIAFRAGRHA GLLLALLLIP FWIDFMIRMS
SWMVLMGRNG TINGILSGIG MIDEPIRMIG TYPAVTVGML YAFLPTTVLP IYAALSGINK
RLLEAADDLG AGPIEAFWRV TFPLSLPGVM AAMLFVFVPA MGVYAIPVLL GGGKSIILGN
LIVQLFLDFR NIPLGAAVSV VMLVVSSVII VFYMRILRRV EEAHA
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