| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8138 |
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| Symbol | traM |
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| ID | 7365056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 94123 |
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| End bp | 94431 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641758 |
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| Product | transcriptional repressor |
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| Protein accession | YP_002540055 |
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| Protein GI | 222080192 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGG AAGATGCCGC AGTGACGAAG AAGGTCGAGC TCCGCCCATT GATCGGGCTG
ACGCACGGAT TACCTCCGGC GGACCTGGAA ACCATCACGA TCGACGCCAT CAGGACGCAC
CGGCAACTGG TGGAGAAAGC CGACGAGCTA TTTCAGGCTC TCCCTGAGAC TTATAAGACC
GGAGAAGAAG CCGGCGGCCC ACAGCATGTC CGATACATTG AAGCGAGCAT CGAGATGCAT
GCGCAGATGA GCGCCGTGAA CACGCTGATC AGTATTCTTG GCTTCATTCC CAAGGTCGTC
GTAAACTGA
|
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| Protein sequence | MELEDAAVTK KVELRPLIGL THGLPPADLE TITIDAIRTH RQLVEKADEL FQALPETYKT
GEEAGGPQHV RYIEASIEMH AQMSAVNTLI SILGFIPKVV VN
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