| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8127 |
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| Symbol | yci |
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| ID | 7365212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 83870 |
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| End bp | 84310 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641749 |
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| Product | nuclease |
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| Protein accession | YP_002540046 |
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| Protein GI | 222080183 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.129752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATTGA GACTTTTTAC GGCAGTCGCC AGCCTATCCC CCTTAGCCAT TGGCATCCTC
GCGTCTGTTG CCTCAGCGCC GCCGAGCAGC GCGAGCGAAG CCTTCTCTAT CTGCGGAAGC
GGGCAACGTA TCACCTGCGT GGTGGATGGT GATACGTTCT GGTTTAGAGG TGAGAAGATC
AGGATCGCCG ACATCGACAC GCCGGAGCTC AGCCCGCCAA GATGCGAGCG CGAACGCGAG
CGCGGACTTG CGGCAAAACA GCGTCTGCTC GAGATCCTCA ATTCGGGTCC GGTCTCGTTC
AAGACGACCG CCAGGGATGA AGATCGCCTC GGTCGCAAGC TCAGGATTGT CTACCGCGAG
CGACGATCGG TCGGCGATAT TCTCGTCGCC GAAGGCTTGG CTCGGAAGTG GGAAGGATCG
CGCCGGAGCT GGTGCGGATG A
|
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| Protein sequence | MTLRLFTAVA SLSPLAIGIL ASVASAPPSS ASEAFSICGS GQRITCVVDG DTFWFRGEKI
RIADIDTPEL SPPRCERERE RGLAAKQRLL EILNSGPVSF KTTARDEDRL GRKLRIVYRE
RRSVGDILVA EGLARKWEGS RRSWCG
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