Gene Avi_8119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8119 
Symbol 
ID7365207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp82014 
End bp82316 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content65% 
IMG OID643641744 
Producthypothetical protein 
Protein accessionYP_002540041 
Protein GI222080178 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00762818 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGA TCGGTTCGTT CACCCTCAGC AATGACGGCA CCTACACCGG CACCATCAAG 
ACCCTCGCCA TCGACGCCAA GGCGCGCCTC GTCCCCAGCG ATCCCGCAGC CACCAGCGAC
AAGGCGCCCG ACCTGCGGGT CATCGTCTCC GGCGTCGAGA TCGGTGCCGC CTGGCGCCGG
ACCTCCAAGG AGGATCGGAC CTACCACTCG GCCAAGCTCG ACGATCCCTC CTTCAGCGCA
CCCATCTACG CCAACCTCTT CGAAGGCGAC GATGGCAAAT ATGCCCTGAT CTGGTCGCGC
TGA
 
Protein sequence
MSQIGSFTLS NDGTYTGTIK TLAIDAKARL VPSDPAATSD KAPDLRVIVS GVEIGAAWRR 
TSKEDRTYHS AKLDDPSFSA PIYANLFEGD DGKYALIWSR