Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8104 |
Symbol | |
ID | 7365200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 73595 |
End bp | 74479 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643641738 |
Product | transposase |
Protein accession | YP_002540035 |
Protein GI | 222080172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.272838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGGTGATC CGGTTCAATG CCCGTGGCCC CGACGGTCTT CTGGACGGCA AGGCGCCGGG CAAGCCGTCG ATCCTCAACG ATGCCCAGCG TCGTGCGCTG GTCGAGGCGG TCGAGCGCGG GCCGATCCCG GCGATCCATG GTGTCGTGCG TTGGCGGTTG ATCGACCTTG TGTATTTGCT GCACGAGGAG TTCGCGGTGT CGCTCGACGA AACCACCGTG AGCCGCGAGT TGAAAAAGCT GGGCTATGTG AAGCTGACCG CGCGACCACG TCATCATGCG CAGAACGAGC TGGCCATGGA GACATTCAAA AAGGGGGCTT TGCTGCCGAA GTGGCAAAGG TCCGGACAAG CCTCCCGAAG GGCACGTCCA TAGAAGTCTG GTTCCAAGAC GAGGCCCGCG TCGGTCAGAA GAACACCATC ACACGGCGCT GGGCCAGACG CGGAACACGA CCCTCGGCGC CCAAGGACCA GCGCACGAAA TCGGCCTACA TCTTCGGAGC CATCTGCCCC GAACAGGGCA AGGGTGCCGG GCTGATCCTG CCCTTTTGCA ACACAGAAAC GATGTCGCTA CATCTCGCTG AGATCGCGCT CGCCGTAGCG CCGGGCGCGC ACGCCGTGGT GTTGATGGAC CAGGCCGGAT GGCACATGAC CGACAAGCTC GAGGTCCCCG ACAACATCAG CATCATCGCG CTACCCGCCA AGTGTCCCGA GCTGAACCCG GTCGAGAACG TTTGGCAATT CATGCGCGAT AACTGGCTTT CCAATCGCGT TTTTACCTCC CACGACAATA TTCTCGACCA CTGCTGCGAG GCTTGGAACA AGCTGGTCGA TCAGCCTTGG CGCATCATGA CCATCGGCCG CCGAAAATGG GCTCGTCAGT TCTGA
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Protein sequence | MGDPVQCPWP RRSSGRQGAG QAVDPQRCPA SCAGRGGRAR ADPGDPWCRA LAVDRPCVFA ARGVRGVARR NHREPRVEKA GLCEADRATT SSCAERAGHG DIQKGGFAAE VAKVRTSLPK GTSIEVWFQD EARVGQKNTI TRRWARRGTR PSAPKDQRTK SAYIFGAICP EQGKGAGLIL PFCNTETMSL HLAEIALAVA PGAHAVVLMD QAGWHMTDKL EVPDNISIIA LPAKCPELNP VENVWQFMRD NWLSNRVFTS HDNILDHCCE AWNKLVDQPW RIMTIGRRKW ARQF
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