Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8089 |
Symbol | |
ID | 7365192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 65582 |
End bp | 66406 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641731 |
Product | PEP phosphonomutase |
Protein accession | YP_002540028 |
Protein GI | 222080165 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACA AGGGCAGAAC GTTTCGACAG CTGCATGAAG GATCAGGGAC GTTTATCATT CCCAACCCTT GGGACATTGG TACAGCTCGG ATTCTCGCAG CATTGGGCTT TCCGGCGCTC GCGACCACCA GCGCCGGGAT GGCTTTTTCT CTCGGCGTGC CGGAGGGCAT TGTGTCGAGA GATGATACTC TGGACAATTG TCGGGCAATC GTGGCAGCTA CGTCTCTGCC AGTTTCTGCC GACCTTGAGA AAGGTTTTGG GGACAGTCCC GAGAGTGCTG CAGAGACGAT CGTCACCGCC GCCAGCATCG GACTTGCGGG TTGTTCTCTT GAGGATCACA CCGGTCAGCG TGATAATCCA GTTTACGACT TCACGTTGGC CGTCGAACGC ATCGCGGCGG CAGCTGAAGC CCGCCGCGCC TTGCCAAGTG ATTTTGTTTT GACGGCTCGG TGCGAGAATT TCCTGTGGGG CCGCCCCGAT CTCGATGACA CAATCAAGCG GTTGCAAGCT TTCGAGAAAG CCGGTGCTGA CGTACTCTAT GCACCTGGTC TCCACGACCT CGACACGATC CGCACTGTTT GCGAGGCTGT GACGAAGCCC GTCAACATCG TTATGGGGAT GCCAGGAGCA ACGTTCGGCA TCGCAGAACT GTCGGAGGCT GGTGTCAAAC GTATCAGTGT TGGGTCGGCG CTCGCGAGGC TCGCATTCGG CGCTTTCGCA AACGCGGCCC GAGAGATGAA ATCGGCGGGC ACTTTCCGGT TTTCGGAGGA CGCTATGGGC TTCGCGGAGC TCGAAGGTTT TTTCAACGGC ACGACGAAAG CTTAG
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Protein sequence | MEDKGRTFRQ LHEGSGTFII PNPWDIGTAR ILAALGFPAL ATTSAGMAFS LGVPEGIVSR DDTLDNCRAI VAATSLPVSA DLEKGFGDSP ESAAETIVTA ASIGLAGCSL EDHTGQRDNP VYDFTLAVER IAAAAEARRA LPSDFVLTAR CENFLWGRPD LDDTIKRLQA FEKAGADVLY APGLHDLDTI RTVCEAVTKP VNIVMGMPGA TFGIAELSEA GVKRISVGSA LARLAFGAFA NAAREMKSAG TFRFSEDAMG FAELEGFFNG TTKA
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