Gene Avi_8089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8089 
Symbol 
ID7365192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp65582 
End bp66406 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content58% 
IMG OID643641731 
ProductPEP phosphonomutase 
Protein accessionYP_002540028 
Protein GI222080165 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACA AGGGCAGAAC GTTTCGACAG CTGCATGAAG GATCAGGGAC GTTTATCATT 
CCCAACCCTT GGGACATTGG TACAGCTCGG ATTCTCGCAG CATTGGGCTT TCCGGCGCTC
GCGACCACCA GCGCCGGGAT GGCTTTTTCT CTCGGCGTGC CGGAGGGCAT TGTGTCGAGA
GATGATACTC TGGACAATTG TCGGGCAATC GTGGCAGCTA CGTCTCTGCC AGTTTCTGCC
GACCTTGAGA AAGGTTTTGG GGACAGTCCC GAGAGTGCTG CAGAGACGAT CGTCACCGCC
GCCAGCATCG GACTTGCGGG TTGTTCTCTT GAGGATCACA CCGGTCAGCG TGATAATCCA
GTTTACGACT TCACGTTGGC CGTCGAACGC ATCGCGGCGG CAGCTGAAGC CCGCCGCGCC
TTGCCAAGTG ATTTTGTTTT GACGGCTCGG TGCGAGAATT TCCTGTGGGG CCGCCCCGAT
CTCGATGACA CAATCAAGCG GTTGCAAGCT TTCGAGAAAG CCGGTGCTGA CGTACTCTAT
GCACCTGGTC TCCACGACCT CGACACGATC CGCACTGTTT GCGAGGCTGT GACGAAGCCC
GTCAACATCG TTATGGGGAT GCCAGGAGCA ACGTTCGGCA TCGCAGAACT GTCGGAGGCT
GGTGTCAAAC GTATCAGTGT TGGGTCGGCG CTCGCGAGGC TCGCATTCGG CGCTTTCGCA
AACGCGGCCC GAGAGATGAA ATCGGCGGGC ACTTTCCGGT TTTCGGAGGA CGCTATGGGC
TTCGCGGAGC TCGAAGGTTT TTTCAACGGC ACGACGAAAG CTTAG
 
Protein sequence
MEDKGRTFRQ LHEGSGTFII PNPWDIGTAR ILAALGFPAL ATTSAGMAFS LGVPEGIVSR 
DDTLDNCRAI VAATSLPVSA DLEKGFGDSP ESAAETIVTA ASIGLAGCSL EDHTGQRDNP
VYDFTLAVER IAAAAEARRA LPSDFVLTAR CENFLWGRPD LDDTIKRLQA FEKAGADVLY
APGLHDLDTI RTVCEAVTKP VNIVMGMPGA TFGIAELSEA GVKRISVGSA LARLAFGAFA
NAAREMKSAG TFRFSEDAMG FAELEGFFNG TTKA