Gene Avi_8086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8086 
SymbolrzcA 
ID7365191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand- 
Start bp64493 
End bp65224 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID643641730 
Productrhizobiocin/RTX toxin 
Protein accessionYP_002540027 
Protein GI222080164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.257177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACTT TGACCCTTGC ATGTCTGGCA CCGTGTTTCG GATGGGCGGA GGAGACTCCG 
ACTGTTCCGC CCGCGAACCT AGCGGTACAG ATCCTCAACT TCGATGCCGC CAACCCCACC 
GTACCTTGGA TCCGTCCTCC GGAAGTGCAG TTCGTGCTCC TCAGCGGTTG CGGCGGCGGC 
GGCGGCGGCG GGACCACTAC TGTCACCGGA TCGGGCAGCA ACACGAATAG GGTGCCGGGG 
AAGGGTGGCG GCGCGGCACG GCTGTACACC ATCATCGTTC CCGTCAAGGC AGACCGCTAC 
GACATAACGA TCGGCGATGG CGGTGGCAGC GCTGCGAACG GCATGCCAAC GACAATGACG 
GGCGCGGGCG CGGGCGCGGC GGCGATCACG TTAGGGGGAG GTCAGCAAGG ATCGAGCGTT 
TCCGCGGACG GCGAGGCCAG TCCGTTCGGG CCAGGCGGCA AGGGGGGGAC ATCGGTGGCG 
GAGGCGTCCG GGAAAAACCC CTGCTCAGGC GGCGGCGGAT CGGCGGCATA TTGGACAGCG 
GTTGGTGGAA AAGGTGCGCC CGGTCAGCTC ACGATCATGC CCATACCTGA CCTCGCGCGC 
TTCGGAAGAG TCATGGCGAT GGTGGAGGAT CTCTCCCAAC CGCCGAAGGT GCCGGACGAT 
GCGAACTCGA CATCCGGCGA AGACGAGCAA GGGCCGGTGG CGGCACCCGG TGGGACGGGC 
TCGCTCAAAT GA
 
Protein sequence
MFTLTLACLA PCFGWAEETP TVPPANLAVQ ILNFDAANPT VPWIRPPEVQ FVLLSGCGGG 
GGGGTTTVTG SGSNTNRVPG KGGGAARLYT IIVPVKADRY DITIGDGGGS AANGMPTTMT 
GAGAGAAAIT LGGGQQGSSV SADGEASPFG PGGKGGTSVA EASGKNPCSG GGGSAAYWTA 
VGGKGAPGQL TIMPIPDLAR FGRVMAMVED LSQPPKVPDD ANSTSGEDEQ GPVAAPGGTG 
SLK