Gene Avi_8078 details

Gene Information

• Locus tag: Avi_8078
• ID: 7365186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011982
• Strand: +
• Start bp: 54336
• End bp: 54938
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643641725
• Product: hypothetical protein
• Protein accession: YP_002540022
• Protein GI: 222080159

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.429436
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTCT CCACCATCCG CAAAGTTTTT GAAGGTGTTG CCGATATCAG GCAGATGTTC 
CGCATGTTCG ACCGCCACGC GCAGCGCCCG AACCGATGGG AGGGCGACGA CAGTGCGCTC 
TACAGCGGTG AATGGTTCGA GATTGGCGAG ACATGCCACG ATTACATGCT CGAGATCCTC 
CCGCCGCTGT GGATGCGGGG GGAGATGTTC GCCATGCGCG AGTTCCTGAC CGGCTCGATC 
ACCAGCATCT TTTTCACGCT CTTGATCGAC GGGCACATCC GCTATTTCCA TGGTTACTGT 
GATCTGGCTG ACAAGGGCTC TCCCGAACGC ATGCGCAACG CGATCATCGA GCGCGAATCC 
CGGCCCGTTC GGGCGATGAC GCGTGAAGAG CGTCTCGAGC ATATCTGGTC GAGCACGGCG 
GATGACTATC GCGGCTATGC CGGCGAACGT TGGCCGTCAA GCGATCATGG CAAGCGTACG 
GTCCTGATCT ACGGCGGAAA GGAGGGCACA TTCCTGAAGC GGCTCGACCA GCTCACCGAT 
ACCGAGATAT CCGCGAAACT GCCGGTGCAT CTGCGATATC TGCCCGACGC GATCGCGGCG 
TGA 

 

Protein sequence

MTLSTIRKVF EGVADIRQMF RMFDRHAQRP NRWEGDDSAL YSGEWFEIGE TCHDYMLEIL 
PPLWMRGEMF AMREFLTGSI TSIFFTLLID GHIRYFHGYC DLADKGSPER MRNAIIERES 
RPVRAMTREE RLEHIWSSTA DDYRGYAGER WPSSDHGKRT VLIYGGKEGT FLKRLDQLTD 
TEISAKLPVH LRYLPDAIAA