| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8070 |
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| Symbol | |
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| ID | 7365178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 47843 |
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| End bp | 48883 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641718 |
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| Product | transposase |
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| Protein accession | YP_002540015 |
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| Protein GI | 222080152 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.837659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCAT GGCTCCCCGA CCCAAAAAGG TCAAGGAATC CGGTGCCTTG TCGGCAGGCA
CCAACCGACG TACTTCGGGG TTACTACGCC CCAAGGCTGC GCGCAGCCCC AATTTGTTTT
ACAATGGAAC AGGTTAATGT TTTAATCTTT TCTGAGCATG GGATAGATTC TCAACGCGGA
TTGGCGCTTG GCCTGCAAAG CTTTGCCGGG CTTGTCGCAG TTTTTTCGGT TAACGGTATG
TTGACCATCG GAAGAGAAAT TCCGCTCCTA TTGTTGCGGA GCGTACCGAT GGTTCTGAAT
GCCATTACCG AGAAGCTGAA ACGCCAATCG AAAGACGATT TCAAGGGACG ACATTTTGAG
GCGTGGCTGA TCGTGCAGGC GGTTGCCTGG TATTTGCGTT ATCCGCTCAG CTATCGCGAT
TTGGAGGAAA TGGTCCGGGA ACGCGGTTTC GAGATTGACC ATAGCACGAT CAACCGCTGG
GTTCTGGCCT ACGCACCGAT GATCGAGAAG CGATTACGTC AGTTTCGTCG GCCACATTGC
GGCTCGGTTC GCGTCAATGA GACCTACGTC AAGATCCGCG GCAAGTGGCG ATACGTGTAT
CGCGCAATCG ACAAGCACGG CAATCCCGTC GACTTTCTGC TGACGGCAAA GCGCGATCTT
GATGCCGCCA AGCGGTTCTT CCGCAAGATG CTGAAGGACG AGCCCTTGTT GTCACCGAAT
AAGATCGGCA CGGATGGCGC CAATACGTTT CCGTCGGCGA TCAAAACATT GGTCGATAGC
GGGCTGTTGC ATCCAGATCC TGTGCACTAT GCCACCAAGC ATCTCCAACA AGGCATCGAA
AGCGATCACT TCCGGCTGAA GAAGAACATG CCCAAGATCG GCGGGGTCCA GTCATTCAAC
ACTGCGCGGC GAACCATCGC GGGTTTCCAG GCGATGCTGT GGTTGAGGAA AGGCTTCGGC
TATTCCGGCG GCTGGATCGT CAACGACCAG AACGATCTGC TTGCGCGCCT CTTCGGACTG
CAAAAGGTTA ACAAAGTATA A
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| Protein sequence | MRPWLPDPKR SRNPVPCRQA PTDVLRGYYA PRLRAAPICF TMEQVNVLIF SEHGIDSQRG
LALGLQSFAG LVAVFSVNGM LTIGREIPLL LLRSVPMVLN AITEKLKRQS KDDFKGRHFE
AWLIVQAVAW YLRYPLSYRD LEEMVRERGF EIDHSTINRW VLAYAPMIEK RLRQFRRPHC
GSVRVNETYV KIRGKWRYVY RAIDKHGNPV DFLLTAKRDL DAAKRFFRKM LKDEPLLSPN
KIGTDGANTF PSAIKTLVDS GLLHPDPVHY ATKHLQQGIE SDHFRLKKNM PKIGGVQSFN
TARRTIAGFQ AMLWLRKGFG YSGGWIVNDQ NDLLARLFGL QKVNKV
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