Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8066 |
Symbol | |
ID | 7365175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 44012 |
End bp | 44956 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641715 |
Product | hypothetical protein |
Protein accession | YP_002540012 |
Protein GI | 222080149 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0556463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAC TTTTCGAGCG AGCGGAAACG GGTTCGGCAA CATCATTCCG CGACCTGCAT ATCATCCTCG ATGCCATGCC TGTTGCCATG TCCTGGGCGA CCCTTCCGGG CGGGGACATC CGTTTCGTCA ATCGCACCTT TATCAGGTTG TTCGGATATC CTGAAAGCCG TTTCGCAACC GTCGATGAGT GGATTGCAGA AGTCTACGCA ACGTCGGCAG AGCGGCGTAC CGCCCGCGAA CGTTGGGCCG CTCTCTGGAG GGGAGACCAA TCGGGCATTG CGGAAATCGA TCCGCTTGAA TGCCGGGTGC GTTGTGCTGA TGGGACATAT CGCACAACGC TCCACCGCGG GACCTTACTT TGGGATGTCG GGATAGGGAT CGCTACTTTC GAGGACATTT CAGATCGCAA AATTGCCGAA GACGCCATCC GTCGCATCGC AATGGAAGAT CCTCTTACCG AACTCGCAAA CCGCCGGGCG TTGCACGAGC GCTGGGAAAC CGAAGTCACA TCGGCACCAA CGAAAGCCAA CCTCAAGCTG GGGGTCCTGC TCGTTGACCT CGACGGTTTT AAGCCGGTCA ACGACCGTCT GGGGCACGAG GCTGGCGATC AAGTCCTGAA GATGGTTGCC GATCGCCTGC GCAACGCCGT CCGCGATACG GATCTCGTCG GCCGGATTGG TGGCGATGAG TTTGTGGTTC TGTTGTCCAG CCTTCAGAGC GACACACAGG CAGAGGCTAT CTGTGATCGC ATCAATGCCA CCTTTGACGC GCCATTCGTA TTTGATGTGG AAACGATAAC CCTTGGCGCG AGCATCGGGG TCAGCCTTTA TCCGCAAGAC GCCACAGATC TGGCCGGTCT TATACGGCAA GCCGATCAGG CTCTTTACAG ACGAAAAAGG ACAGGGCGGG GTGGTTGGGA ATGGTTCTCC AATCCCGCCG CATAA
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Protein sequence | MKELFERAET GSATSFRDLH IILDAMPVAM SWATLPGGDI RFVNRTFIRL FGYPESRFAT VDEWIAEVYA TSAERRTARE RWAALWRGDQ SGIAEIDPLE CRVRCADGTY RTTLHRGTLL WDVGIGIATF EDISDRKIAE DAIRRIAMED PLTELANRRA LHERWETEVT SAPTKANLKL GVLLVDLDGF KPVNDRLGHE AGDQVLKMVA DRLRNAVRDT DLVGRIGGDE FVVLLSSLQS DTQAEAICDR INATFDAPFV FDVETITLGA SIGVSLYPQD ATDLAGLIRQ ADQALYRRKR TGRGGWEWFS NPAA
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