| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8061 |
|---|
| Symbol | |
|---|
| ID | 7365173 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011982 |
|---|
| Strand | - |
|---|
| Start bp | 41549 |
|---|
| End bp | 42644 |
|---|
| Gene Length | 1096 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGCA GGCAAGCGGG CTTTGTCGCT CTGAGCGACG AGGATAGAAA TTTTCTTGAG
TCTCAGGTGC GGCGGCACAA GGCGCCGCGC TCGCTGTCGG ATCGATGCCG GATAGTTTTG
CTGTGCGCGC AGGGCTTGCG GAGCAAAGAT GTTGCCGAAC GCCTTGGCGT CCACGAGCAC
ACGGTTGGCA AGTGGCGCCG CAGGTGCGTG CAGGGTGGCA TTGACGGGCT GACCGACGAA
TATCGCGCAG GTCGGCCACG AACCGTCTCT GACGCCCAGG TAGCTGAGGT CGTCGAACGG
ACATTGAACA CCACCCCGAA GGATGCCACG CACTGGTCTA TCCGTTTGAT GGCAGCCGAC
CGCGGGCTGT CGCACACCAC CATCCGTCGG ATATGGACCG CGTTTGGTTT GCAGCCGCAT
CGTTCGGAGA CATTCAAGCT GTCTTCCGAT CCCCTGTTCG TTGATAAGGT GCAAGACATA
GTCGGCCTTT ACATGTCGCC ACCTGATCGG GCAGTCGTGC TATGCGTGGA TGAGAAATCG
CAAATCCAGG CACTGGATCG CGAGCAGCCG GTTCTGCCCA TGGCGCCGGG CATCGCCGAG
CAGCGGCGCA CCCATACCTA TGTCCGCAAC GGCACGACAT CCCTGTTCGC CGCGCTCGAC
GTTGCGACTG GCGCGGTAAT CGGCCAGTGC TACAAACGTC ACAGGGCGAC CGAATTTCTC
GACTTCTTGA AGCGGATTGA CGCCGAGATG CCCAAGGGGC CGGACGTGCA TTTGGTGATG
GACAACTATG CGACCCACAA GACGCCGAGG ATCAAGGCCT GGCTCGCACG CCGCCCGCAT
TGGCATGTTC ACTTCACGCC AACGTCAGCC TCCTGGATCA ATCAAGTCGA GCGGTGGTTT
GCAGAGCTGA TGCGCAAGCA ATTGCAACGC GGTGTCATCG TTCCACCGCC GAACTGGAAG
CCGACATCGA CGCGTTTATC GCAACGCACA ACGAGAATCC CAAGCCATAC AGATGGGTGA
AATCCGCCGG CCAAATCCTC GCCTCCGTCA AGCGATTCTG CCAAAAAACA ATGAGCCGAA
CTTCAGATTC CGGTGA
|
|---|
| Protein sequence | |
|---|
| |