| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8035 |
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| Symbol | tnp |
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| ID | 7365160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 30726 |
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| End bp | 31265 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641708 |
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| Product | transposase |
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| Protein accession | YP_002540005 |
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| Protein GI | 222080142 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CTGATCCGAG CGCATTGGGA CGATATTCTG CGCCTGATTA CTTCGCTGCG CACGCGCACC
GTCAGCGCCT CGCTCATGCT TAAAAGGCTG TCGGCGAAAA CCAGCCAAAG CGGTTTCTCT
CAGGCACTAC GCCAGATGGG CCGGATCGAA CGAACCCTAT TCACCCTGGA CTGGATCAAT
GACGAGGATC TGAGAAAGAC GACAACGGCA GAGCTGAACA AAGGGGAAAG CCGCAACAGC
CTCGTGCGTG CGGTCAATCT CCATCGCTTC GGTCGCTTCC GAGATCGCAG CCAGGAAAAT
CTTTCGATCC GGGCATCCGC TCTCAATCTG GTCGTCACAG CCATTATTCA CTGGAACACA
ATCTATACCG GCCGTGTCAT CGAGGCCTTG TATCGCGCCG GGCAGCATGT GCCCGATCAT
CTGCTGTCGA GCCTGTCACC GCTAACCTGG GAGCACGTAA ATCTCACCGG TGATTACATA
TGGGAAGACA AGCCGGCGCT CGACGATTCG GGCTGCCGAC CACTGCCGTT CTCGGTCTGA
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| Protein sequence | MIRAHWDDIL RLITSLRTRT VSASLMLKRL SAKTSQSGFS QALRQMGRIE RTLFTLDWIN
DEDLRKTTTA ELNKGESRNS LVRAVNLHRF GRFRDRSQEN LSIRASALNL VVTAIIHWNT
IYTGRVIEAL YRAGQHVPDH LLSSLSPLTW EHVNLTGDYI WEDKPALDDS GCRPLPFSV
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