Gene Avi_8010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8010 
Symbol 
ID7365140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand- 
Start bp10347 
End bp10919 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content56% 
IMG OID643641692 
Producthypothetical protein 
Protein accessionYP_002539989 
Protein GI222080126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCATCCG AAACCGATGC AGTTCAGCGT GGCGGACGTG GCCGGCATGC CACTCGCGCA 
TGTTGTGGAG CGGAACTGTC TGAACCGTGC CGCCGGTTCG ACACCAAGTC AATTTCATCC 
GCAGATCAAA CGTCAGCAGC CTCACTTCTG ATGCAGGCCA ATCACACCAA CCTACAGAAC 
ATGTACGCGA ATAAAGCCGA CGGACAACCG AGTATTGACT CTCCGCACCC AATTGATCAG 
CGTTGCCCTA TGTCCCAGAC GTCGGATTTC ATTGCAAAGC TTGTCCGCGG TGCCAATCAA 
TTGGACCGCC TTGACGCATA CCAGAAACGC AGATTGCTGG AACGGGCTGT CACCACCATT 
CGCGAGATGC GCGCGGCAAT CGGGATGCCG AACGGGCCTG GTCGTGATGT TGTTTTGGAC 
CTCCACACAA CGGCCTTATC CATCGAACAG GGTTGGCGGA CGGATGACCA GGTGCGGAAC 
GCTTTTCTCA CAGCCGCTGG CATGCTGCGT GATCTCCACA TTGTTCTCGA CAGCAAGACA 
TCCATCCGAA TCGTTGTTCC GCTCACCACG TGA
 
Protein sequence
MSSETDAVQR GGRGRHATRA CCGAELSEPC RRFDTKSISS ADQTSAASLL MQANHTNLQN 
MYANKADGQP SIDSPHPIDQ RCPMSQTSDF IAKLVRGANQ LDRLDAYQKR RLLERAVTTI 
REMRAAIGMP NGPGRDVVLD LHTTALSIEQ GWRTDDQVRN AFLTAAGMLR DLHIVLDSKT 
SIRIVVPLTT