| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7694 |
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| Symbol | argD |
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| ID | 7380197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 627075 |
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| End bp | 628355 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641680 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_002539977 |
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| Protein GI | 222102938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.788415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATT CGCAACTCGC GGCACGCCGC ACGAATGCCA TCTCCCGCGG CGTCGGCGTG
ACGACCCAGA TTTATGCCGA ACGGGCCGAA AATGCCGAGA TCTGGGATGT CGAAGGCCGC
CGTTATATTG ATTTTGCTGC CGGGATCGCC GTCGTCAATA CCGGTCACCG ACACCCAAAG
GTGATTGCTG CGGTGAAGGC TCAACTCGAT TGCTTCACCC ATACCTGCCA TCAGGTCATC
CCCTATGAGA ACTATGTGCG CCTTGCCGAG CGCCTTAACC AGGCAGTACC GGGAAATTTC
GAGAAGAAGA CGATTTTTGT GACGACCGGT GCCGAGGCGG TCGAGAACGC CGTCAAGATC
GCCAGGGCGG CAACCAACCG GTCTGCCGTC ATCGCCTTCA CCGGCGCCTT CCATGGACGC
ACCTTCATGG GCATGACGTT GACGGGCAAG GTTACCCCCT ACAAGGTTGG CTTCGGGGCG
ATGATGCCGG ATGTCTTTCA TGTCCCCTTC CCGGTCGAAC TGCATGGCCA GACGATGGAG
GATTCGTTGG CTGTGCTCGA CAAGCTCTTT AAGGCTGATG TCGATCCGGA GCGCGTTGCA
GCCTTCATCA TCGAACCCGT GCAAGGCGAA GGTGGATTTT ACGAAGTACC CCGACTTTTC
ATGCAGAAGC TGCGCCAGAT TGCCGACAAG CACGGTATCC TGCTGATCGC GGATGAAGTC
CAGACAGGCT TTGCGCGCAC CGGCAAGCTT TTCGCCATGG AGCATTTCGG CGTCGTTGCC
GATATCACCA CAATGGCCAA GGGCCTCGGT GGCGGCTTCC CCATCGCGGC TGTCACCGGC
CGGGCGGACA TCATGGACGC ACCGGGCCCA GGTGGTCTCG GCGGCACCTA TGGCGGCAAT
CCGATTGGCA TTGCAGCCGG CAATGCCGTC CTCGATGTAA TCGAGGAAGA GCAACTAGCA
GATCGCGCCA CGTCGCTCGG CAACCGCCTT AAGCAAAGAC TTCATTCCCT GTCCGATGCC
GTGCCTGAGA TCGCCGACAT CCGCGGTCCC GGCTTCATGA ACGCCGTGGA ATTCAACCTG
CCCGGTTCCA AGACACCGGA TGCCGGTTTC ACCAACAAGG TACGGACTAT AGCGCTGGAA
AAAGGGCTGA TTCTTCTGAC CTGCGGTGTG TATGGCAATG TCATCCGCTT TCTGGCTCCC
CTGACGATCG ACGAGAAAAC CTTCGCCGAA GCGCTGGACA TCCTTGAAGA GACATTGCGC
GTCTGCTCCA AGGATAGTTG A
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| Protein sequence | MQNSQLAARR TNAISRGVGV TTQIYAERAE NAEIWDVEGR RYIDFAAGIA VVNTGHRHPK
VIAAVKAQLD CFTHTCHQVI PYENYVRLAE RLNQAVPGNF EKKTIFVTTG AEAVENAVKI
ARAATNRSAV IAFTGAFHGR TFMGMTLTGK VTPYKVGFGA MMPDVFHVPF PVELHGQTME
DSLAVLDKLF KADVDPERVA AFIIEPVQGE GGFYEVPRLF MQKLRQIADK HGILLIADEV
QTGFARTGKL FAMEHFGVVA DITTMAKGLG GGFPIAAVTG RADIMDAPGP GGLGGTYGGN
PIGIAAGNAV LDVIEEEQLA DRATSLGNRL KQRLHSLSDA VPEIADIRGP GFMNAVEFNL
PGSKTPDAGF TNKVRTIALE KGLILLTCGV YGNVIRFLAP LTIDEKTFAE ALDILEETLR
VCSKDS
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