| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7688 |
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| Symbol | |
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| ID | 7380322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 619051 |
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| End bp | 620067 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641674 |
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| Product | transcriptional regulatory protein |
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| Protein accession | YP_002539971 |
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| Protein GI | 222102932 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.636938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGG CGAGAACGCC CTCCGGCTTT GCCTTGGCTA TTGTTTTAGC CTATCAAAAG
CGCGGGATGA CAGAGCAGCC AGCGCTTCTC GCGGCAGGCA TTGATCCCGC CACCCTGCAT
GCAGATGGCA GAATAACAGC CGATCAACTC GAACGCCTGT CAGATCACGC CATGCGCGAG
CTGGACGATG AGGCGCTTGG CTGGTTTTCC CACCGCCTGC CGTGGGGCAG TTATGGCATG
CTGTGCCGCG CATCACTGCC CTCGGCCACG CTGGGCATTG CCATCACGCG ATGGTGCCGC
CATCATAACC TCATCACGCA GGATGTTACG CTCAGTCTCG AAACGCGACG CAATCTGGCT
GAGGTTCGGA TCGAAGAGAA AAGCGAACTT GGCGCTTTTC GGGAGTTTTG TCTGGTCAGC
CTGCTGCGCA ATCTTCAGGG CGTGGCCTCG TGGCTCGGCG ACACGCGCAT TCCCTTGGTT
GATGTTGCGT TTCCATTCGA CGCACCAGCG CATGCTGAAA GCTACCGCTA TCTCTTCAAT
GGCCCTGCGT CGTTTGGCGC GGATCAGGCA AGCCTTCGTT TTGATGCTGC CTATCTGGGC
CTGCCCGTCC TGCGCGATGA TGCTGCCTTG CGACAAATGC TGAGGCGGCC CTTGCCGCTG
ATGGTGCGTC AGTATCGGCG CGACCGTCTG CTCTCGCGCG AAATTCTCCG CTTGCTGAAT
GACATGCCAG CAGCAGGGAT CGATGACCTG GCAGAAAAGC TCAATCTGTC AACCCGCAGC
CTTCACCGCC ATATCAAACA GGAAGGCACA TCGTTTCAGG CGCTGAAAGA TCTGTCGCGC
CAACGGCTGG CAGAGCGACT GCTGGCTTCC ACCCAGTGGC CGATCAAGCG CATTGCCCGC
GAATGTGGCT TTGATGCAGA GGCAAGTTTT GTGCGTGCAT TCAAGTCCTG GACTGGCCAG
ACCCCACGGG CTTTCGCGGT TGCTGCAAGG CAGGGTACAT CATCGCATAA GTCGTGA
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| Protein sequence | MTQARTPSGF ALAIVLAYQK RGMTEQPALL AAGIDPATLH ADGRITADQL ERLSDHAMRE
LDDEALGWFS HRLPWGSYGM LCRASLPSAT LGIAITRWCR HHNLITQDVT LSLETRRNLA
EVRIEEKSEL GAFREFCLVS LLRNLQGVAS WLGDTRIPLV DVAFPFDAPA HAESYRYLFN
GPASFGADQA SLRFDAAYLG LPVLRDDAAL RQMLRRPLPL MVRQYRRDRL LSREILRLLN
DMPAAGIDDL AEKLNLSTRS LHRHIKQEGT SFQALKDLSR QRLAERLLAS TQWPIKRIAR
ECGFDAEASF VRAFKSWTGQ TPRAFAVAAR QGTSSHKS
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