| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7687 |
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| Symbol | fadD |
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| ID | 7380321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 617309 |
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| End bp | 618811 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641673 |
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| Product | long-chain-fatty-acid-CoA-ligase |
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| Protein accession | YP_002539970 |
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| Protein GI | 222102931 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAT CTCGCATCAG CGATTTGGCG TATAACGCAG CCCAACGGTT TGGCGATAAG
ACCGCCTTGA CCCTTCCCGG CCTGCGTTCC TTCAGCTTTC AAGAAATAGA CGATCTGGCA
GGGCGCATGG CCGGAGCGTT TGCGGCGCGC GGTCTGCGAG CGGGTGATCG CATTGTGCTG
CATTTGCCCA ACGGCTGGCA ATGGGTGGTT GCCTATCATG CCATTGCCAG ATTGGGTGCG
GTGGTCGTGC CTGCGAATTT TCTCCTCAGC GCGGAAGAAG TCGCCTTCAT TCTGGACAAT
TCCGAGGCCG CAGCCCTAAT CGTTCCTGCT GATCGCCGCG CCTCTTTCAA AACCAAGGCC
CATGTTTTTA CGCTGGGCGA GGCCCCGGAG GCGGAAGAAC TCACAACACT TCTCGATGGA
GAGTATAGGC TTCCAGTCGA GCGCCGCCCG GACGATCTTT TCACCATCGG CTATACGTCT
GGCACAACCG GGCGTCCGAA AGGTGCCACA ATGACCCATG CCGGGCTTTT TGCGAGTCTG
GCGGGCACGG CCACCATCCA TGTGCGTCAC GATGGCGACG CCGTGCTGAC CTCTCTGCCG
TTTCCGCATG TTTACGGCAA TATCGTCATG AATGCGACCT TTCTCGTCGG GTCGCGGCTG
ATTACCACGC CGCGCTTCGA TGCCGCCGAG GCTTTGCGGC TGATCAGCGC GGAAAAAGCC
ACGCTTTTCG AGGGTGTGCC GACCATGTTC TACCAGATGC TCGCCCATCC GAACATCGCG
AACGCCGGCC TGACAAGCCT GACGCGCTGC ACCGTTGGCG GCCAGACCAT GCCGACTGCC
AAGATTGATG CCGTGACAAG CCGCTTTGGC TGCCCGCTTC TGGAATTGTG GGGCATGACC
GAGGTTGCAG GCCCTGCCAT CACGCACTCG CCCTACTGGA GCCCGCGCCC CGGATCAATC
GGACTGCCGA TGCCGGGTTT GGAGGTGCGC CTCGCCGATC TGGAGGAGCC AAAGCGCGAG
GCCACGCCCG GCAGACCCGG TGAATTGCTG GTGCGTGGTG CCATGGTCAC AAAGGGCTAT
TGGCGCAACG AGGCTGCCAC CATTGAGGCG ATAGACCCTG ACGGCTGGCT TGCGACCGGC
GACATCGCCC GCACCGACGC GGATGGCTAT ATCTTCGTGG TTGATCGCAA GAAGGACATG
ATCATCACCG CTGGCTATAA TGTATATCCG GCAGAGCTTG AGCAGGTGAT TGCCATGCAT
CCGGCTGTTG CCATGGTGGC TGTTGCGGGC ATTGCTGATG AGGAAAAGGG TGAGATTGCC
CAGGCCTTCG TTGTGCCTCA CCGCGATGTG GCATTGAGCG AGGAGGCTTT GCTCAACCAC
TGCCGCAAGC ATCTGGCATC CTACAAAATT CCGCGACGGG TGATTTTCGT CGAAGATCTG
CCGAAAAACA GCACCGGAAA AGTTCTACGC CGCTCGCTGC GAGAGGCCAA CGTCCCCGCC
TGA
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| Protein sequence | MQQSRISDLA YNAAQRFGDK TALTLPGLRS FSFQEIDDLA GRMAGAFAAR GLRAGDRIVL
HLPNGWQWVV AYHAIARLGA VVVPANFLLS AEEVAFILDN SEAAALIVPA DRRASFKTKA
HVFTLGEAPE AEELTTLLDG EYRLPVERRP DDLFTIGYTS GTTGRPKGAT MTHAGLFASL
AGTATIHVRH DGDAVLTSLP FPHVYGNIVM NATFLVGSRL ITTPRFDAAE ALRLISAEKA
TLFEGVPTMF YQMLAHPNIA NAGLTSLTRC TVGGQTMPTA KIDAVTSRFG CPLLELWGMT
EVAGPAITHS PYWSPRPGSI GLPMPGLEVR LADLEEPKRE ATPGRPGELL VRGAMVTKGY
WRNEAATIEA IDPDGWLATG DIARTDADGY IFVVDRKKDM IITAGYNVYP AELEQVIAMH
PAVAMVAVAG IADEEKGEIA QAFVVPHRDV ALSEEALLNH CRKHLASYKI PRRVIFVEDL
PKNSTGKVLR RSLREANVPA
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