| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7682 |
|---|
| Symbol | |
|---|
| ID | 7380317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | - |
|---|
| Start bp | 612135 |
|---|
| End bp | 613373 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643641669 |
|---|
| Product | ferredoxin reductase |
|---|
| Protein accession | YP_002539966 |
|---|
| Protein GI | 222102927 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0742912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGG TGGCCATCAT TGGCTCCGGC CAGGGAGGGT TCCAGTTGGC TGCGAGCCTT
CGTCAGGAGG GGTTTTCCGG GGAGATCACC TTGATCGGAG AGGAAACAGG CCTGCCTTAC
CAGCGTCCGC CGCTTTCCAA GGCTTATTTA AAAGATGGCC GTGCCGAGAG CATTGAGCTG
AGGCCCGACA GCTTCTTTCA CCGAAACAAA ATCGGCCTGA TAGCCGGGGA CCCGGCCATT
CATATCGATC GGGTGACGCG AACTGTGGCG ACCAAGAGCG GTGCCCGTAT CGGCTATAAC
CATCTCGTGC TGGCAACCGG CGCGCGTAAC CTCATCCCGC CGATCCGTGG CCTGGAGGGG
AGCGATGTCT TCGCCTTGCG CACCGCAGCC GATGCGGATG CCCTGCGCGA AGCTCTCGCG
CGGGGTCGTC GCCACCCTGT GGTGATCGGG GGCGGCTTTA TCGGCCTCGA ATTCGCCGCT
GTTGCGGCAT CCATCGGCCA CTCCGTCACC GTCGTCGAGG CAACGGAACG CCTTATGGCT
CGTGCCGTTT CTCGCGCTAT GTCCGGATTC TTTCAGACCT TCCACGAGAT GCACGGCGTG
TCGCTGCACT TCGGGGACCC CGTCAACGAG ATCCTGCGGA GTGAGGATGG CGGGGTTGTG
GGTGTTCGCC TTCTTAGCGG AGCAATTATT CCCGGTGACA TGGTGCTGCT TGCTGTTGGC
GTGCGACCCA ATGTGGAACT TGCCAGAAAC GCTGGGCTTG AGATTGCCAA CGGTATCGCT
GTGGATGCGT ATCTTCTCAC CGCCGATCCA GCCATTTCGG GCCTCGGCGA CTGTGCAGCC
TTTCCAGATC CGGTCACGGG GGAGTTGACG CGGCTTGAAT CCGTCCAGGC CGCCACCGAC
CACGCCCGAA CAATCGCTCG TCGGCTCACG GGAAAATCCG AACCCTATGA GGCCTTGCCT
TGGTTCTGGA GCGATCAGGG GCCATGGAAG TTGCAGATTG CAGGTCTTGC GGTATCGGGC
GATGAGGATC ATCCCCTTGA AGGTGAAAAC GGGCGAAGGC TTGTATTTCG CTTCAAATCG
GGCAAATTGC GTGCAGTGGA GACGGTCAAT GCCGCAGCCG AGCACATGGC CGCACGTCAG
CTTCTAAAGT CGCCAGAAGG GGTGACAGCC GATGAGCTTG TGCAATGCAA CTATGATATC
ACGGCACTGT CGAAATCGAG GAAAGCACGC GCCGCATGA
|
|---|
| Protein sequence | MNQVAIIGSG QGGFQLAASL RQEGFSGEIT LIGEETGLPY QRPPLSKAYL KDGRAESIEL
RPDSFFHRNK IGLIAGDPAI HIDRVTRTVA TKSGARIGYN HLVLATGARN LIPPIRGLEG
SDVFALRTAA DADALREALA RGRRHPVVIG GGFIGLEFAA VAASIGHSVT VVEATERLMA
RAVSRAMSGF FQTFHEMHGV SLHFGDPVNE ILRSEDGGVV GVRLLSGAII PGDMVLLAVG
VRPNVELARN AGLEIANGIA VDAYLLTADP AISGLGDCAA FPDPVTGELT RLESVQAATD
HARTIARRLT GKSEPYEALP WFWSDQGPWK LQIAGLAVSG DEDHPLEGEN GRRLVFRFKS
GKLRAVETVN AAAEHMAARQ LLKSPEGVTA DELVQCNYDI TALSKSRKAR AA
|
|---|
| |