Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7681 |
Symbol | |
ID | 7380316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 611605 |
End bp | 612105 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643641668 |
Product | CbaR |
Protein accession | YP_002539965 |
Protein GI | 222102926 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0113297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACTG GCGCACGCTG CCCGCAAGAC CGCATATCCA GTCCGACGAC CACACGCGAT GGCGTCGAAA TTCTCGATAT CTCGAATTAC ACGCCCTTCT TCTTGTCCAG CATCAACAAT GCCCTATCGC GTGGGGCCTC AAGCGTTTAC CGTGAGCGCT TCGGCATCGG TATCAGCGAG TGGCGCGCGG TATCCATGCT GGCGATCGAG CCCAACATCA CGGCGGGGCG CATCTGTGAT GTCATCAATC TTGACAAGGC CGCCGCAAGC CGCGCTCTGG CGACGCTCGA TGAGCAGGGC TATCTCGACT CGGAGGTCTC GGAGACGGAC CCGCGCAAGA AGCGCTGGCG CCTGAACCAG AGGGGCTATG ACCTTCACGA AGAGATCATG CGGATCGCGC TCGCGCGTGA GGAAACATTG ATTGAGGGTG CAGATCCCCA GGACCTCGAG GCAACCATCC GGGTGATGCG GATCATGTTG AAAAACGTGC AGAACCTGTA A
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Protein sequence | MKTGARCPQD RISSPTTTRD GVEILDISNY TPFFLSSINN ALSRGASSVY RERFGIGISE WRAVSMLAIE PNITAGRICD VINLDKAAAS RALATLDEQG YLDSEVSETD PRKKRWRLNQ RGYDLHEEIM RIALAREETL IEGADPQDLE ATIRVMRIML KNVQNL
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