Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7679 |
Symbol | |
ID | 7380314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 608583 |
End bp | 609776 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643641666 |
Product | Permeases of the major facilitator superfamily |
Protein accession | YP_002539963 |
Protein GI | 222102924 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00772538 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATC TTGATACAAA GGGTACCCGC ACAGCCCTTA TTGTCGGTCA TGCGGCCGGT ATGATCGATA TGGTCTCTCT TCCCATTTGG GTCGGTGGAC TGGTCGGTGG CTATGGCTAT TCATCCGCTC AAGCCGGAGG ACTTGTCACC ACATTTCTGA TTGGGGTGGT GATTGCCAGT TGCGGCCTTG CGACGCTTTT CCATCGCTTT TCCATGCGTT GGGTGCCCGG TGCAGGCTTT AGCGGGGCTG CGCTGGCGTT CGCAGCACTC TGGATGGCAT CAGGTTTCGG CAATTTTCTC GCACTTCACC TCTGTGCCGG TCTTTGCATC GGCACGGCTT TGTCAGCGGT TCATGGAACC ATTGGCCGCA CAAGCAATGC TCATCGCACA TTTGCTTATG CCACCATTGG CTTTGGCATC TTCAGCGTTA TCTTCATGGG CTTTGCCACG CAGGTGATTG CCGCAATGCA GCCACGCAAC CTGTTCTTGA TTTTTGCCGG GGTTATGGCG ATCGCTGCCG CAGTCAATTG GTTGCTTTTC CCCCACAGCG CCACCATGCC GAAGGCGGAG AAAAAACCAT CGCCCAATTC CGGTCGCGTG CCGCGTTTTG AACCCGTCGT CTGGTTTCTC ATCGCCGCTC TGCTGGGCAT GAACTTCAAT CAGGCCATGA ATTTCAGCTT TGTTGAGCGC ATTGCCAGTG ACCATGATTG GCCAACATCC ACCATCAACG GCATTCTTGT GGGCGTTGCC TTTCTCAGCC TCATTCCGGC CCCGCTCGCA GTGTTTTTTG AAAAAAAGCT TCATCCGGTT TATGTGGGCA TAGTAGGCGT GCTGCTTCAG GCCGCTCTTT CGCTGGGCAT AACCCATGCG CTCGACGTTC CCGGTTTTGC CGCCTCGGCA ATCTTCATTC CCTTTGTCAT GATCTTCTCG CACACATTTC TCTTCGGACT CATGTCGCGC GTGGAACCAA CTGGCCGAGC AGTGGCGGCC AATCCGGCCA TTACCATGGG CGGCGGAGCG CTTGGGCCTC TGGTTGGCGG CATTCTGGTC CAGACAATGG GCTATCATGG CCTCAGCCTT GCAACCGCTC TGGTGGCCAC CTGTGTTGTG GCGGGACTAA TGCTGGTGCT GATGCGCCTG TTGCCCTCGC ACGCCAGCAA CGCACTAGCC CCAAAAAGGC ACTGGCCATT GTGA
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Protein sequence | MTNLDTKGTR TALIVGHAAG MIDMVSLPIW VGGLVGGYGY SSAQAGGLVT TFLIGVVIAS CGLATLFHRF SMRWVPGAGF SGAALAFAAL WMASGFGNFL ALHLCAGLCI GTALSAVHGT IGRTSNAHRT FAYATIGFGI FSVIFMGFAT QVIAAMQPRN LFLIFAGVMA IAAAVNWLLF PHSATMPKAE KKPSPNSGRV PRFEPVVWFL IAALLGMNFN QAMNFSFVER IASDHDWPTS TINGILVGVA FLSLIPAPLA VFFEKKLHPV YVGIVGVLLQ AALSLGITHA LDVPGFAASA IFIPFVMIFS HTFLFGLMSR VEPTGRAVAA NPAITMGGGA LGPLVGGILV QTMGYHGLSL ATALVATCVV AGLMLVLMRL LPSHASNALA PKRHWPL
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