| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7663 |
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| Symbol | |
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| ID | 7380303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 598067 |
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| End bp | 598774 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641655 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002539952 |
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| Protein GI | 222102913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGGGT TCGATCTCTC AGCAATTCTT GGCAATCCAG ACTATGTCTC CATGCTGCTG
CACGGCATAG AGATGACCTT CATTATCGCC ATTGGCTCAT GGGTTTTGGC GATGACACTT
GCGGTTTTAC TGCTGGCGCT GCGGTTTTCG CCGGGCGGTA TCGGCAATGC CATTGTCACG
GCCTATGTTT CCTATCACCG CAATGTGCCA ACGCTTGTGC AGCTGGTGCT GTGGTATTTT
GGCATTTTCA CCCTGATGCC CAGCGGCCTC AGCGCATGGC TGGTCAATCA CAATGCCGAA
ACCATCTTTG CGGTTATCGG TCTTGGCCTG TGTCAGGCCG CTTACTTCAG CGAAGACCTG
CGCTCAGGCC TGCGCTCCAT CAGCCCAGGC CAGATGGAAG CGGCCCGCGC CTTGGGCCAC
GGCTATCTCT CGGCCATGCG TTACGTGATG ATTCCGCAAG GGGTGCGCAA TGCACTGCCA
CCGCTGATCA ATCATACGGT ATCGCTGTTT AAAAACAGCA GTCTTGCGAT TGTTGTTGGT
GCGTCAGAGC TTACCCATGC CGTGAAGGAA ATCGAAAACA TCACCTTCAG AACATTTGAG
AGCTATCTGA TTGGCACGGT GCTGTATCTG TTCTTTTCTC TGCTGATCAT GGCAGGCGGC
GCGTATCTGC AGTGGCGCGT TGATCATGCA AGGGGTGTGC GGGCATGA
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| Protein sequence | MKGFDLSAIL GNPDYVSMLL HGIEMTFIIA IGSWVLAMTL AVLLLALRFS PGGIGNAIVT
AYVSYHRNVP TLVQLVLWYF GIFTLMPSGL SAWLVNHNAE TIFAVIGLGL CQAAYFSEDL
RSGLRSISPG QMEAARALGH GYLSAMRYVM IPQGVRNALP PLINHTVSLF KNSSLAIVVG
ASELTHAVKE IENITFRTFE SYLIGTVLYL FFSLLIMAGG AYLQWRVDHA RGVRA
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