| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7662 |
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| Symbol | |
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| ID | 7380302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 597318 |
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| End bp | 598070 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641654 |
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| Product | short-chain dehydrogenase |
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| Protein accession | YP_002539951 |
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| Protein GI | 222102912 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTT CGGATTACAA AACTGCGCTT GTCACTGGCG CATCCTCCGG GATCGGAGCC
GCTATTGTGG AGCGGCTGTG CGCTGAGAAT GTTGAAGTGC ATGCGGTTGC CAGAAGTGGT
GATCTCCTCA AACAGCTTTC CGAGAAAACC GGCTGCATTG CCCATGTGAT TGACGTCACG
GATCGCGCCG CTCTGGCGGA CCTCACATCC AAAATTCCAT TTGATATTCT CGTCAATAAT
GCCGGTGTTG ACCGTCCAAA GAAGTTTCTG GAAGCAGAAG ACGGCGATAT TGACCTGCTG
GTGGATGTGA ACCTGCGGGC TGTCTTGCAT CTGTGCCGCA TGGTTGTGCC GGGCATGGTG
GCGCGCGATC GTGGCCACGT TATCAACATC TCATCCATCG CCGCTCAGTA TAATTTCGGT
GGAAATTCCT CCTATCACGC TACCAAGGCT GGCGTCAGCA TGCTGTCCAA CCAGTTGCGC
ATTGATGCCT TTGGCAAGCG CGTGCGGGTC ACGGAAATCT GCCCCGGCCG CGTTGCAACC
GATATTTTCA CCCATGTCCA CGGTGATGAC CCTTCAGTGC GTGAGCGCTT TATTGATGGC
TTTGAATTGC CACAGGCGTC CGACATTGCC GATGCCATTG CCTTTGCCAT TGCCGCACCC
ATTGCCGTTA ACATCGGCCA TATGGAAATC ACCCCCACCC TACAAGTGAT GGGCGGATTG
CAGACGGCCA AGCCGGAGGA GCGGAAGCCT TGA
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| Protein sequence | MPFSDYKTAL VTGASSGIGA AIVERLCAEN VEVHAVARSG DLLKQLSEKT GCIAHVIDVT
DRAALADLTS KIPFDILVNN AGVDRPKKFL EAEDGDIDLL VDVNLRAVLH LCRMVVPGMV
ARDRGHVINI SSIAAQYNFG GNSSYHATKA GVSMLSNQLR IDAFGKRVRV TEICPGRVAT
DIFTHVHGDD PSVRERFIDG FELPQASDIA DAIAFAIAAP IAVNIGHMEI TPTLQVMGGL
QTAKPEERKP
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