Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7658 |
Symbol | |
ID | 7380298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 593064 |
End bp | 594062 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641650 |
Product | hypothetical protein |
Protein accession | YP_002539947 |
Protein GI | 222102908 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.403453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGG TTCTCACCAC TGGCCCCCTC AACACCGTGC AGGATCTTGG CCGTTTTGGA TTTCGCAACA TCGGCGTCAC CACCTGTGGC GCGATGGACC CTGTTGCGCT GAAAATCGGC AATCTGATGC TGGGCAATGA TGAGGGGGCC GCAGGCCTTG AGATTCAGAC CTTTCCCTTT CGGCTGCGGT TTGAAAAGGA CGGTTTTGTC GCTATCACCG GAGCCGACTG CGCGGCAACG CTGGACGGCA AAGCCATGCC GCCATGGTGG GCGCTTCCGG TTTTCGCAGG GCAAGAGCTT GAGCTGAAAA CACCCACCAA AGCGGCTCGG GCCTATCTGT GCTTTTCCGG TGGCATTGAT GTGCCGCTGG TGATGGGGTC TCGCAGCACG TCGTTGCGGG GAGCCTTTGG CGGTTATCAC GGGCGGTTTT TGGCGGTTGG TGATCGTCTC GCTTTAGGTG AGGCGCAGGC TCTGCCGATC CCATCCTCCG GTTTCGGCGT GATGCCGCCA GAGGTGGCAT TGCAGGATCA TTTTCCAGCG GTTGAGAATG GCATTTTGCC CATCCGCGCC CTGCCCGCAG GCGAGCATGA CTGGTTTGGC GAAGAATCGA TGCGGTTCTG GGCGCAGGAT TGGAAAATCT CCTCCCAGAG CGACCGCACC GGCTATCGCC TGTCTGGCGC TCCGGTGAAG CTCAAGGAGC ATGTTGAAAT GCGCTCCCAT GGCGTGGTCA CAGGCGTGGT GCAGGTGCCG CCTGCGGGTG AGCCGATCAT TCAAATGAGC GATGCCAATA CCGCAGGCGG TTATCCCAAA ATGGCGGGTG TGATTGACAT TGACCTCTGG CGCTTGGGCC AAGCCCGCAT TGGCAGCCGC ATCCGCTTTG TTCAATCCAC TCTGGCTGAG GCGAAAGCCG CAGAACAAGC CGTGGCGGGC TATTTGGCCG ACATTCGCAA CACCGTGCCG CTGTTGACCG ACGCCCTCGC CACCATGACC AAGCGCTAA
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Protein sequence | MIEVLTTGPL NTVQDLGRFG FRNIGVTTCG AMDPVALKIG NLMLGNDEGA AGLEIQTFPF RLRFEKDGFV AITGADCAAT LDGKAMPPWW ALPVFAGQEL ELKTPTKAAR AYLCFSGGID VPLVMGSRST SLRGAFGGYH GRFLAVGDRL ALGEAQALPI PSSGFGVMPP EVALQDHFPA VENGILPIRA LPAGEHDWFG EESMRFWAQD WKISSQSDRT GYRLSGAPVK LKEHVEMRSH GVVTGVVQVP PAGEPIIQMS DANTAGGYPK MAGVIDIDLW RLGQARIGSR IRFVQSTLAE AKAAEQAVAG YLADIRNTVP LLTDALATMT KR
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