Gene Avi_7658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7658 
Symbol 
ID7380298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp593064 
End bp594062 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content60% 
IMG OID643641650 
Producthypothetical protein 
Protein accessionYP_002539947 
Protein GI222102908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGG TTCTCACCAC TGGCCCCCTC AACACCGTGC AGGATCTTGG CCGTTTTGGA 
TTTCGCAACA TCGGCGTCAC CACCTGTGGC GCGATGGACC CTGTTGCGCT GAAAATCGGC
AATCTGATGC TGGGCAATGA TGAGGGGGCC GCAGGCCTTG AGATTCAGAC CTTTCCCTTT
CGGCTGCGGT TTGAAAAGGA CGGTTTTGTC GCTATCACCG GAGCCGACTG CGCGGCAACG
CTGGACGGCA AAGCCATGCC GCCATGGTGG GCGCTTCCGG TTTTCGCAGG GCAAGAGCTT
GAGCTGAAAA CACCCACCAA AGCGGCTCGG GCCTATCTGT GCTTTTCCGG TGGCATTGAT
GTGCCGCTGG TGATGGGGTC TCGCAGCACG TCGTTGCGGG GAGCCTTTGG CGGTTATCAC
GGGCGGTTTT TGGCGGTTGG TGATCGTCTC GCTTTAGGTG AGGCGCAGGC TCTGCCGATC
CCATCCTCCG GTTTCGGCGT GATGCCGCCA GAGGTGGCAT TGCAGGATCA TTTTCCAGCG
GTTGAGAATG GCATTTTGCC CATCCGCGCC CTGCCCGCAG GCGAGCATGA CTGGTTTGGC
GAAGAATCGA TGCGGTTCTG GGCGCAGGAT TGGAAAATCT CCTCCCAGAG CGACCGCACC
GGCTATCGCC TGTCTGGCGC TCCGGTGAAG CTCAAGGAGC ATGTTGAAAT GCGCTCCCAT
GGCGTGGTCA CAGGCGTGGT GCAGGTGCCG CCTGCGGGTG AGCCGATCAT TCAAATGAGC
GATGCCAATA CCGCAGGCGG TTATCCCAAA ATGGCGGGTG TGATTGACAT TGACCTCTGG
CGCTTGGGCC AAGCCCGCAT TGGCAGCCGC ATCCGCTTTG TTCAATCCAC TCTGGCTGAG
GCGAAAGCCG CAGAACAAGC CGTGGCGGGC TATTTGGCCG ACATTCGCAA CACCGTGCCG
CTGTTGACCG ACGCCCTCGC CACCATGACC AAGCGCTAA
 
Protein sequence
MIEVLTTGPL NTVQDLGRFG FRNIGVTTCG AMDPVALKIG NLMLGNDEGA AGLEIQTFPF 
RLRFEKDGFV AITGADCAAT LDGKAMPPWW ALPVFAGQEL ELKTPTKAAR AYLCFSGGID
VPLVMGSRST SLRGAFGGYH GRFLAVGDRL ALGEAQALPI PSSGFGVMPP EVALQDHFPA
VENGILPIRA LPAGEHDWFG EESMRFWAQD WKISSQSDRT GYRLSGAPVK LKEHVEMRSH
GVVTGVVQVP PAGEPIIQMS DANTAGGYPK MAGVIDIDLW RLGQARIGSR IRFVQSTLAE
AKAAEQAVAG YLADIRNTVP LLTDALATMT KR