| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7630 |
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| Symbol | |
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| ID | 7380279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 566633 |
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| End bp | 567988 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641631 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539928 |
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| Protein GI | 222102889 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.497873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC CAATTGCCGC CGCCGCGAAG GCTGCTTCGC CTTTCCGCAT CGCCATTGTC
GGTGCAGGCC CGAGCGGCTT CTACGCCGCC GAAGCTCTGT TGAGAGCACC GATCAACATT
CAAGTCGACA TGTTCGAGCG GCTGCCGGTG CCCTATGGCC TGGTGCGGTT CGGCGTGGCG
CCGGATCATC CGAAATTAAA ACAGGTGACC GCCGTATTCG ATCGTATTGC CAGCATGCCC
GGCTTCCGCT TTGTCGGCGG GATCGACGTG GGGATCGACG TGACGATAGA CACGCTGTTT
GATTGCTATC ATGCCGTCAT TCTTGCGACG GGTGCTGCGT TAGGTCGAAA GATGGGTATT
CCTGGCGAGA GCCTGCCGGG AAGCCACCAG GCTAGCGATT TCGTCGGCTG GTATAACGGT
CACCCTGACT ATCGCGATTG CTGCTTCGAC CTCTCCGGTG AGCGTGCGGT GATTGTCGGA
CATGGAAATG TCGCTCTCGA TATTGCCCGC ATCCTGCTGA AGACGACCGA CGAATTACGT
CATAGCGACA TCGCGGCCCA TGCGCTGGAG GCCTTAGCCG AAAGCAAGAT CCGCGAGGTG
CAGGTCGTCG GGCGTCGTGG CCTGCTCGAA ACGCGCTTTT CGGCCAAGGA ATTGCAGGAG
TTCAGCATGC TCTCGGACTG CGACCCCGTC CTTGATCCGG ACGATCCGGT GCCGGATGTC
GCCGCTTTGC CTGATGGCAC TGACGCCGAG AAAAGGGCAG CTGTCAGCAT GCTGGCATCG
TTCTCGACGC AGATCTCGGA TCGGAAGCGG CGTTGCGTGT TCCGGTTCCA TCTGCAGCCG
CACGCTATCG AGGGAAGAGA TCGGGTTGAG CGGATGGTAT TCAGCCGAGG CTCCAGCCTA
TCCGGCGATA AGTCTATGCC GGTTTCCATC GACTGCGGTC TCGTATTTTC CAGCATCGGC
AGACGGTCTG CGCCCGTTCC GGGCGTTGCC TATGACGAGG CGAGGGGCGT TCATGCCAAT
GTAGCAGGAC GAGGCCCTCA TCAAGCGACC TATGTTTGTG GGTGGAGCAA GCGCGGCCCA
CAAGGCACGA TTGGTACCAA CAGGGCATGC GCAGTCGAAA CCGTGCAGCA TGTTCTTGCC
GATCTTTCCA GCAATGGTCA TCGCGTGCTC GCGGATGCCG ATGCCTTGAT CGCAAGGCTG
GCCGGTAAGC ATGGTGTCCA CATCGATTTC GCGTCGTGGC AGGCTATCGA TGCTGCGGAA
TTGGAGCAAG GCCGCCTTGC TGGAAAGCCC CGAGAAAAAT TTTTGTCTGT CGACCAGATG
ATTTCTGTCG TCACAAAGAG ACGCACAGCA TGCTAA
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| Protein sequence | MTIPIAAAAK AASPFRIAIV GAGPSGFYAA EALLRAPINI QVDMFERLPV PYGLVRFGVA
PDHPKLKQVT AVFDRIASMP GFRFVGGIDV GIDVTIDTLF DCYHAVILAT GAALGRKMGI
PGESLPGSHQ ASDFVGWYNG HPDYRDCCFD LSGERAVIVG HGNVALDIAR ILLKTTDELR
HSDIAAHALE ALAESKIREV QVVGRRGLLE TRFSAKELQE FSMLSDCDPV LDPDDPVPDV
AALPDGTDAE KRAAVSMLAS FSTQISDRKR RCVFRFHLQP HAIEGRDRVE RMVFSRGSSL
SGDKSMPVSI DCGLVFSSIG RRSAPVPGVA YDEARGVHAN VAGRGPHQAT YVCGWSKRGP
QGTIGTNRAC AVETVQHVLA DLSSNGHRVL ADADALIARL AGKHGVHIDF ASWQAIDAAE
LEQGRLAGKP REKFLSVDQM ISVVTKRRTA C
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