| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7612 |
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| Symbol | |
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| ID | 7380264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 552863 |
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| End bp | 553261 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641616 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_002539913 |
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| Protein GI | 222102874 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCA TTACCATCAC CATTGACGAC GACCTCATGA CTGAGCTGGA CCGAATGATC
GAGGCAAAAG GCTATCAGAA CCGCTCCGAA GCCTTGCGCG ATCTGGCGCG GGCCGGGTTG
AAACAGGCCT CAATCGAGGA GGGGCATATT GCGAATTGCG CCGGTGTTTT GAGCTATGTG
TATGACCATG AAGCGAGAGA TCTCGCCAGC CGCCTGACCA CGACCTTTCA TGATCACCAT
GATCTTTCTG TGGCCAGCAT GCATGTGCAT CTGGATCAGC ACCGCTGTCT TGAGATCAGC
GTTTTGCGCG GCAAAACCGA AGAGGTGCGC CACTTTGCCG ATCATGTGAT GGCAGAGCGC
TCCGTCACCT ATGGTGAGCT GAAAATTATC CCGGCATAA
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| Protein sequence | MQRITITIDD DLMTELDRMI EAKGYQNRSE ALRDLARAGL KQASIEEGHI ANCAGVLSYV
YDHEARDLAS RLTTTFHDHH DLSVASMHVH LDQHRCLEIS VLRGKTEEVR HFADHVMAER
SVTYGELKII PA
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