| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7608 |
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| Symbol | |
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| ID | 7380261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 549161 |
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| End bp | 550033 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641613 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002539910 |
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| Protein GI | 222102871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTTT TTGCTCAACC CGTCAGCATG GCTATCGCAC CTCCGATCGG CAAGCCGATA
CGGTGGGGGC AGATTACATC AGGCACCAGC GCGATTCTTG CGCTGGCGCT CCTCATCACC
ATCGTCGCGC GAAACCAGAG CGTTCAATGG GGCGAAATAC CCCGTTACAT GGTTGATCCA
GTCATCCTCA GCGGCGTTGT TCTGACCTTG CAACTGACAT CAGGCGCAAT GGTGTTCGGT
ATCGCTTTCG GCTGCATCGT TGCTGTCATG GCAACAAGTC AGAATATCGT TTTGAAAGCC
CTGGCAATTG CCTTCGTCTG GTGGTTTCGT GGCGTGCCGC TCATCGTCCA GATCTTCTTC
TGGTTCAACA TCGCGTTGTT CATTCCGGAA GTGGGCATTG GCAGCTACTC CATATCGATC
AACGCGCTCG TCACTCCGGC ACTTGCCGGG TTCTTGGCGC TGGGCCTGCA TGAAGCCGCC
AATATGAGCG AGATCATTCG CGGCGGATTG ACCGCCGTCG ACCGGGGCCA ACGAGAGGCA
GCCTCGTCAC TCGGCTTGCG ACCACTTCAG ACCCTTCGAA CCGTGGTTTT GCCCCAAGCG
GTCCGTCTGA TCGTACCGCC TACGGGCAAC CAGGCGATTG GCATGCTGAA GGCCAGCGCC
ATCGTATCCG TCATCGGTAT GCAGGATTTG CTGACCCAGG CGCAGGCCAT CTATGCGCGC
AACTTCCTTG TCATCGAGCT CCTGTGCGTT GCGTCGCTCT GGTACCTCCT CATCACAACC
CTTGCTTCGA TTGGCCAGTA TTTCCTGGAA AAGCACCTGG CCCCGAAAGG CCGGAACGCC
GGTGCACAGA AAGATCAGCC GCGACGCGGC TGA
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| Protein sequence | MSLFAQPVSM AIAPPIGKPI RWGQITSGTS AILALALLIT IVARNQSVQW GEIPRYMVDP
VILSGVVLTL QLTSGAMVFG IAFGCIVAVM ATSQNIVLKA LAIAFVWWFR GVPLIVQIFF
WFNIALFIPE VGIGSYSISI NALVTPALAG FLALGLHEAA NMSEIIRGGL TAVDRGQREA
ASSLGLRPLQ TLRTVVLPQA VRLIVPPTGN QAIGMLKASA IVSVIGMQDL LTQAQAIYAR
NFLVIELLCV ASLWYLLITT LASIGQYFLE KHLAPKGRNA GAQKDQPRRG
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