| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7604 |
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| Symbol | |
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| ID | 7380259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 546481 |
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| End bp | 547722 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641611 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002539908 |
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| Protein GI | 222102869 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTG CTGCTTTCAC TGCCATGATC GACACCGTAG GCAACATCGT CGATCGACCA
AATCTCTGTC TTGTGCCGCA AAGCCTTGAG CGCTTTGGCA ACACGGGGCA ACTGAAGGGG
ACATTCATGG CAGAGACCTC AAAGGCCGCA GAGGGCAAGC ATCTCAGCAT TCGCGGTCTG
ACACACAGCT ATGGCGGACA GAACGCGATC AGCGACATCT CGTTTGAGAT AGAGGCTGGC
GAGATCGTCG CTCTTCTCGG GCCAAGCGGC TGTGGCAAAT CTACCGTCCT GCGTGCCATC
GCGGGGCTGA TCCAGCCGAA GAGCGGGGTT ATCAAGCTTG GCGGCCAGGA CCTTGCCAAT
GTTTCGGCCC GCTCCCGCGG CATCGGCATG GTGTTCCAGA ATTACGCCCT GTTTCCGCAC
CTGACTGTGG CCGAGAACAT CGCCTATCCA CTGGCCTGCC AGCAGGTTCC GCGCGCAAAG
CGCAGGGAAA GGGTGGAGGA AATGCTCTCA CTCGTGCAGT TGAAGAGCTA CGGCAACCGG
CTGCCACGCG AACTTTCCGG CGGTCAGCAG CAGCGTGTCG CGGTTGCCCG CGCCATTGCC
GGACGCCCCT CGCTTCTGCT GCTCGATGAA CCGTTCGGGG CGCTCGACAG GGCGCTTCGT
TTCGATCTGC AGGTCGAGCT TCTGCATTTG CAGAAGACGC TCGGGATCAC GACGCTGATC
GTTACGCATG ATCAGGAAGA AGCCCAGAGC CTCGCCGGTC GGCTCGTGCT GATGAACAAG
GGCAATGTCG AGCAGATCGA CACGCCCATG GCCGTTTATG ACCGGCCGAA GACGCTTTTT
GTCAACACCT TCATTGGCCA GGCCAATGTG CTGCATGGGA CGGTGGAGCG CCTGGATGCA
GATGCAACCA GCATTGCGCT GGTGAACGGC AAGGCCATTG CTCTGCCGCG TCGACTGAAC
TTTACGATCG GTTCCAAGGT GACAATGACC TTCCGTCCCG AAGATGTCCG TCTGTCTGCC
AACCCGAGTG ACCTTGCTTT GCCGGCCAGG GTGACCGTAT CCGTGCCACT TGGGCCGACG
CTCGTCCACG ATCTTCTTCT TGACGATGGG ACAGGCCTTC GCGCGTCGCA GGTCCGCAGC
CCTTCCACCT TCATTCCAGA GCCGGGAGCC CAACTCTTTG CCGAGATCGA CACCGCCAGG
TGTCACGCCT TTCCGAGCGA ACCGGAAGCA TCCAGTCAAT GA
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| Protein sequence | MQIAAFTAMI DTVGNIVDRP NLCLVPQSLE RFGNTGQLKG TFMAETSKAA EGKHLSIRGL
THSYGGQNAI SDISFEIEAG EIVALLGPSG CGKSTVLRAI AGLIQPKSGV IKLGGQDLAN
VSARSRGIGM VFQNYALFPH LTVAENIAYP LACQQVPRAK RRERVEEMLS LVQLKSYGNR
LPRELSGGQQ QRVAVARAIA GRPSLLLLDE PFGALDRALR FDLQVELLHL QKTLGITTLI
VTHDQEEAQS LAGRLVLMNK GNVEQIDTPM AVYDRPKTLF VNTFIGQANV LHGTVERLDA
DATSIALVNG KAIALPRRLN FTIGSKVTMT FRPEDVRLSA NPSDLALPAR VTVSVPLGPT
LVHDLLLDDG TGLRASQVRS PSTFIPEPGA QLFAEIDTAR CHAFPSEPEA SSQ
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