| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7602 |
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| Symbol | |
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| ID | 7380257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 544583 |
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| End bp | 545410 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641609 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002539906 |
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| Protein GI | 222102867 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA GCGGTTTCCC ATACGTTGTC CCGATGCTTC TGCTGTCGGT GGCGTTCTTT
GCGACGCCGC TCGCCGTTCT CGTCGGATTC AGCTTCATCG GCCCCGACGG CCTTTCTCTC
CACAATTACG CACGGTTTTT TGGCGATGCA TTTAACTACC GTGTTCTGGT CAACACCGCC
ACGCTCGGTC TCCAGACCAT TGCCAGCACG ACCCTGCTCG GTGTTCCGAT CGCGCTTTTC
TATTGGCACA GTGGCAAGAC CGCGCGACAG GTCATCATCT TTCTGACACT TATTCCGATG
CTGACCAGCA ATGTGGTTCG GACCTTTGCC TGGATCGTCA TTCTTGGACG ACAGGGACCG
ATTAGCGAGG CATTTGTCGC GCTTGGGCTC GCGGACCGCC CGTTCACGCT GATGTCCACC
GAACTCGGTC TCGTCATGGC GATGTGTCAG ATCGACCTGC CTTTGATCAT CTTGCCTTTG
ATTGCCATTC TCTCGCGCAC GCCGGTGCAG TTCACCGAGG CGGCGCAGGT TTCAGGCGCG
GGTCCATGGC GTATCTTCGT GACGGTTCTC CTGCCAATGA TGCTACCCGG TCTGCTGGCG
GGCTGGATCC TTGTGTTTGC CAGCACCAGC GCGTCCTTCG TCACCCAGGC GGTCATCGGT
GGTGCGCGAA ACGTCTATGT ACCGCAGCTG ATCTATCGAG AAGTGGGCAC GCTGTTTGAT
TGGCCGATGG CCTCTGCCAT CGCCGTTGTC CTCCTTCTGT CAACCGGCAT CCTTCTCGTC
GTCATGACCA TGATTTCACG TCACAGGAGG CTTGTCGGCC ATGCATAA
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| Protein sequence | MKASGFPYVV PMLLLSVAFF ATPLAVLVGF SFIGPDGLSL HNYARFFGDA FNYRVLVNTA
TLGLQTIAST TLLGVPIALF YWHSGKTARQ VIIFLTLIPM LTSNVVRTFA WIVILGRQGP
ISEAFVALGL ADRPFTLMST ELGLVMAMCQ IDLPLIILPL IAILSRTPVQ FTEAAQVSGA
GPWRIFVTVL LPMMLPGLLA GWILVFASTS ASFVTQAVIG GARNVYVPQL IYREVGTLFD
WPMASAIAVV LLLSTGILLV VMTMISRHRR LVGHA
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