Gene Avi_7595 details

Gene Information

• Locus tag: Avi_7595
• ID: 7380252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 539865
• End bp: 540536
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643641604
• Product: transcriptional regulator TetR family
• Protein accession: YP_002539901
• Protein GI: 222102862
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGAAG AAAAGCAGAC ACAGAAGCAG CCTCGGCGCC GACATCCGCG CAGGCCAGAT 
TTGTCTCAAA ACCGAATTCT GGAGGCTGCC GTTGTCGAGT TTGCGGCAAA TGGTCTGACT 
GGCACCCGGG TTGAAGCTAT TGCTGAACGG GCTGAGATCA ACAAGCGAAT GATCTATCAG 
TATTTCGGAA GCAAGGAATT GCTCTACCAG GCGGTGATCG AGAAGGTCTA TCGCGATGTG 
TGGGATGCCG AGGCGGCGTT GAATCTCGAG CAGCTACCAC CGCGCGACGC GCTGATCGCC 
TTGGTCACGT TCGTCTGGAC ATATTACCTT GAACACCCGG AATTCATTAC CATCCTGAAC 
TCCGAGAACC AGTTGAAAGC CATCCACTTC AAAAAGTCCC GCGCCATCCG GGAAGGTGCT 
GCCAGCTCCC GGCCACTCGT CGATGACATC CTGCGGCGTG GTGAGGCGGA TGGCACCTTT 
CGTCTTGGAA TTGATCCGAT CCAGTTGAGC CTGACGATCA CCTCGATCTG CTACTACTAT 
TTCACCAACC AAGCCACCAG TTCAATCGTC TATGGGCAGC GAATGATGAC GCGGGCGGCC 
TTGGAACGGC GCCTCGCTTT CAACATTCAG ACGGTTCTGG CCATCGTAAG CCCTGATCGG 
AGCGCGCTGT GA 

 

Protein sequence

MTEEKQTQKQ PRRRHPRRPD LSQNRILEAA VVEFAANGLT GTRVEAIAER AEINKRMIYQ 
YFGSKELLYQ AVIEKVYRDV WDAEAALNLE QLPPRDALIA LVTFVWTYYL EHPEFITILN 
SENQLKAIHF KKSRAIREGA ASSRPLVDDI LRRGEADGTF RLGIDPIQLS LTITSICYYY 
FTNQATSSIV YGQRMMTRAA LERRLAFNIQ TVLAIVSPDR SAL