| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7566 |
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| Symbol | tnp |
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| ID | 7380098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 512660 |
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| End bp | 513391 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641580 |
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| Product | transposase |
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| Protein accession | YP_002539877 |
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| Protein GI | 222102838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATGGTT GGTCGCCCCA GCAGATCGCC GGTCGCATGC GGCTGGAACA GCATCCGATC
TTTGTCAGCC ACGAGACAAT TTACAAGTTC GCATACTCGG CCGACGGTCA TGCCATCAAG
CTGTGGCGTC ACCTGCCGGA GCATCGAGCT AAGCAACGAC CACAACATGC AAGACGTAAG
CATGGTCAAA GGTTTGGCCC GGAACTCAAC ATTCTGCATC GTCCGAATGT CGTTGCTGAA
CGCAAGCAGT TCGGGCATTG GGAATGCGAT CTGATTCAGT TCCGGAAGAA GTACGGCAAG
GCCAACGTGA CATCGCTTGT TGAGCGGGTG AGCCGCTTCA CGATCTTGTT GCGCAACAAT
GATCGCCAGT CCCGCCCGGT CATGGATGGC ATCATCCAGG CGCTGATGAG CCTCCCTCAC
CTCGCCCGCC GATCGTTGAC ATTCGACCGA GGCACCGAAT TCACTGACTG GCCGTACCTT
CAGGCAGGCA TAGGCACGCA AACATGGTTT TGTGACCCAC AATCGCCCTG GCAGAAAGGA
ACGGTCGAAA ATACAAATAG GCGAGCGCGG AAATGGCTTT CCAGGGACGT CGATCCCTTG
TCCGTAGCCG CCGCCGATCT GATGGAGATC TGCAATCGGC TCAATCAGAC ACCGCGTAAA
TGCCTCGGCT ACCGAACGCC GGCTGAGGTC TTCCGCAAGA AACTGCTCGC GCAGATGCGA
CATGCCAGGT AG
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| Protein sequence | MHGWSPQQIA GRMRLEQHPI FVSHETIYKF AYSADGHAIK LWRHLPEHRA KQRPQHARRK
HGQRFGPELN ILHRPNVVAE RKQFGHWECD LIQFRKKYGK ANVTSLVERV SRFTILLRNN
DRQSRPVMDG IIQALMSLPH LARRSLTFDR GTEFTDWPYL QAGIGTQTWF CDPQSPWQKG
TVENTNRRAR KWLSRDVDPL SVAAADLMEI CNRLNQTPRK CLGYRTPAEV FRKKLLAQMR
HAR
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