| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7564 |
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| Symbol | |
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| ID | 7380096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 510783 |
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| End bp | 511328 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641578 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_002539875 |
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| Protein GI | 222102836 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCTCCA GGCCGGTTAA TCTCGATGAG GCGCTTGATG GCTGCGCAAA GGGCGACCGC
CTGGCATTGC GACACATCTT TGATCAGGAG GCGGGTAAGC TCATCGCGGT TGCCCAGCGC
ATCGTCAGAC GTCGCGAGCT TGCTGAAGAG GTCGTGCAGG ACTCCTTCAT CCGTATATGG
ACGCATGCCT ACCAGTACCG TTCTGATAGC GGGTCGGCGC GCGGCTGGAT CTATGCCATC
GTTCGAAACC GGGCGCTCAA CCTGTTGCGT GATGGCAAGC GGGAACACTC CGTCGAGGAG
GTTGAAACAC TTCAGGGCGA TCAGCAGACG GATGAAATCA TGGCAGCATG GCACCGCCTG
GATCGCAATT CCCGTCTCTA TGACTGTCTC GGTGCGCTAG AAGATACAAA GCGGCAGGGA
ATTCTCATGG CCTATGTTGG CGGTTATTCC CATGGCGAAA TTGCAGGCAG GCTGCGCATT
CCGCTCGGCA CCACCAAGTC GTGGATCAGG CGCGGGCTTC TGGCGCTGCG GGAGTGCATG
GCATGA
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| Protein sequence | MGSRPVNLDE ALDGCAKGDR LALRHIFDQE AGKLIAVAQR IVRRRELAEE VVQDSFIRIW
THAYQYRSDS GSARGWIYAI VRNRALNLLR DGKREHSVEE VETLQGDQQT DEIMAAWHRL
DRNSRLYDCL GALEDTKRQG ILMAYVGGYS HGEIAGRLRI PLGTTKSWIR RGLLALRECM
A
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