Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7561 |
Symbol | |
ID | 7380094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 509109 |
End bp | 509534 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643641576 |
Product | hypothetical protein |
Protein accession | YP_002539873 |
Protein GI | 222102834 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0385242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCACA GTGCTGCCCG TTACACGGAT AAAAATAACG CGATTGTCTG CCTTTCTCCA GATGTGTGCC TGACGCCGCG CGGGTCAAAG GATGTGGCGG TTCCTTACAT GATCCTATCG AAGCTGGAAG CGAGCGAGCG GACTGTCAAG AATGTCTCTT TCGGCGGCGA TGAAGCCTTT ACGATGAACA GCAGAACCTC AACAGTCACA GGGAACGAGG CCGGAACAAG CGGCGGTGTT CAATCCGGCG TCAATACCGG TTGGTGCCGG CCGCAATCGA ACAAAACAAG CTTTTTCGTC AACGGACATC AAGTGATTCA AGACAATTGT CTTCATGAGA TGAACTGTTC GGGGCCGGAT GGATCGTCAA ATACCCTGGG TAAGCTGATG TTTGTTGATA CGGACGGTCG TGGGAGAGAT GGCTGA
|
Protein sequence | MSHSAARYTD KNNAIVCLSP DVCLTPRGSK DVAVPYMILS KLEASERTVK NVSFGGDEAF TMNSRTSTVT GNEAGTSGGV QSGVNTGWCR PQSNKTSFFV NGHQVIQDNC LHEMNCSGPD GSSNTLGKLM FVDTDGRGRD G
|
| |