| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7560 |
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| Symbol | |
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| ID | 7380093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 507987 |
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| End bp | 509033 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641575 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539872 |
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| Protein GI | 222102833 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5351] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.693668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTCA AAACCAAACT CCCTTTCCAG CACCTCTATT TTCGCCATTG GGGCCGCGAT
GATCGCGAAA TGGCTGTTCT GATCGTAAAG GCAGGATTGC GCATTCCATA TGGCGGCATC
GCGGAAGATC TGCTGTCTCC GCAGCCGGAC CTTCTTCTCA CCGATCTGTT TCACAGGGAG
ATCAATGACT CGCCGCTTCG CCAGGAAAGC GACCTAGCGC CCTTCAAGCC AAAGACAGAT
GTGACGTTCA ATGCCGTTGC CTGCTCGCCG GAAGAGAAGG AAATCGATAG TTGGCCCGTG
TCGATTGCTG TCGATGGACG GTTGTCTCAC AGCTTTCACG TTTTCGGGGA GCGGTTTTGG
GAACCGCAGA CCCGAGCGGC GAGGCGAAAG TGGAAACTCT CGTCGGTAAA GCCGACGACG
TCCATACCTT TGACCTATGA ACGAGCTTAT GGTGGCGTCG CACCGATATC GTACGAAGAG
CATACTACGC ACGCTTATAA TCCTATAGGA CGCGGCCTGA TCTCCGATTA TCTACTGGAG
ATGAACCGGG AGGTTGCCGC CCCGCAGATT GCGCTTGTCG GCGAATTTGC CGCTGAGCGC
CCAACTGAAT CTATGACGGT CTGCGGTTGT GGGCCAATTC AAAAATCCTG GCTGCCGCGG
CTATCTCTCG CCGGCACATT CGATGATGCC TGGGTTCGAG AGCGCCATCC GCGCATGCCT
CTCGATTATG ATTTCGCCTA TTGGAATGCA GCACCGCTGC CGATGCAGGC AGCCCCTTAT
CTGATTGGCG ATGAAACCAT CAGGCTCACA GGGTTTCGGC ACGATCCAAG GCCTTATGTG
TTTCGGCTGC CGGGAATGGC ACTTGGCATC AAGATTAGAC GCGAAGGCCT TCAGGATATT
ACCGAGCACA TGTTGAATCT GGATACGGTT CACTGCGATA TCGCTGACGG CGTGCAGGAA
CGACATACCC TTAGTATGAC CTGGCGTCTG ACATTGGCTG AACCGGATGA CATTAGGGAA
ATTGAAATGT TCGCACGACG GCCATAG
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| Protein sequence | MHLKTKLPFQ HLYFRHWGRD DREMAVLIVK AGLRIPYGGI AEDLLSPQPD LLLTDLFHRE
INDSPLRQES DLAPFKPKTD VTFNAVACSP EEKEIDSWPV SIAVDGRLSH SFHVFGERFW
EPQTRAARRK WKLSSVKPTT SIPLTYERAY GGVAPISYEE HTTHAYNPIG RGLISDYLLE
MNREVAAPQI ALVGEFAAER PTESMTVCGC GPIQKSWLPR LSLAGTFDDA WVRERHPRMP
LDYDFAYWNA APLPMQAAPY LIGDETIRLT GFRHDPRPYV FRLPGMALGI KIRREGLQDI
TEHMLNLDTV HCDIADGVQE RHTLSMTWRL TLAEPDDIRE IEMFARRP
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