Gene Avi_7553 details

Gene Information

• Locus tag: Avi_7553
• ID: 7380088
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 500590
• End bp: 501249
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643641570
• Product: hypothetical protein
• Protein accession: YP_002539867
• Protein GI: 222102828
• COG category: [R] General function prediction only
• COG ID: [COG4111] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.805753
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGACT GCGCCATTTT CACCCTCAAG GACCAAGCGC TGCATTTACT TCTGCCGGAG 
CGGGCCAAGA ATCTCCAGAC AGGCCAGCGG GCACTGGTGG GTGGTCGGCT TCACCTCAAT 
GTGGACCGTT CGCCGGAGGA TGGAGCAATG CGGGTCGCAC GAGAGAAACT TGGGATCGAC 
GTGCGCTATC TTGAGCAATT ACACAGTTTT GGTGGTCTGG ATCGGGATGA AGGTTGGACA 
GTAACGATCG CCTATATCGC CATTGTGCAG ATGGATCAGA TCCCGGTCTC GCTGCAGTCA 
GACCTGTTTC CGGTCGACAA GATACCGAAG CTAGCTTTCG ACCACAATGA AATCGCAGCG 
ATGGCGATCG CCCGCATGAG GAGCAAATCG TCTTACTCTT CTTTGCCGGC ATTCCTGCTC 
CCGCCAGAAT TCACAATCGA TGATCTCAGG CATGTCTATC AGCAGGTCAC AGGTGCAAAG 
CTCGTAAAAA CGACCTTTCG AGACCAGGTA TTGCGCCAAG GGTTTGTGGA AAAAACCGGA 
AAGATGAGCA CTGGCCGCAC ATATCGGCCA GCCGAACTAT GGAGACTAGC AGACCGCACA 
GTCGCGAATT TTAACCGCGT TGTATCTCGG GAGGCGGGTT ATCGCCGTGC CATTAAGTGA 

 

Protein sequence

MVDCAIFTLK DQALHLLLPE RAKNLQTGQR ALVGGRLHLN VDRSPEDGAM RVAREKLGID 
VRYLEQLHSF GGLDRDEGWT VTIAYIAIVQ MDQIPVSLQS DLFPVDKIPK LAFDHNEIAA 
MAIARMRSKS SYSSLPAFLL PPEFTIDDLR HVYQQVTGAK LVKTTFRDQV LRQGFVEKTG 
KMSTGRTYRP AELWRLADRT VANFNRVVSR EAGYRRAIK