Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7544 |
Symbol | |
ID | 7380081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 488445 |
End bp | 489587 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643641563 |
Product | von Willebrand factor type A (vWA) domain-containing protein |
Protein accession | YP_002539860 |
Protein GI | 222102821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.183043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAG CCGCAGCACT TGACCCGCTC ACCCGCTGGC GCCTTATCCT GGGCGAGGCG TCGGACGCTG CCTGCAGCGC TGCCGGCTGC ACGATGTCGG GCGATGCCAT GGCCATGGAT GCAGCTCTCG ACTGGCTCTA CGGCCGTGAT GATGAGGACG GCGCCCGCAA TATCAGCCGT CAGGGCGGGC GCGGTCCCTC CGCCCTCACC ACGCCGCAAT GGATCAACGA CATCCATCGG CTGTTTCCCA AGGAAACCAT CGAGCGGCTG GAGCGCGATG CGATCGAGCA TTATGCCATC GATGACATCG TGACCAATCC CGACGTCCTG TCGCGGGCCG AACCCAACGA GACACTGCTG AAGGCGGTTC TGCGGACCAA GCACCTGATG TCGCCTGACA TCCTTGTGAT GGCACGCAAG CTGGTGCAGG AGGTCGTGCG CCAGCTGATG GAAAAGCTGT CGCGGGAGAT GGCGGTCGCC TTTTCCGGCG TCGTTGATCG GCGGCGCCAC AGCCGTTTCA AGATCGCCAG CGATCTCGAT TTCCGTCGTG TTCTGAAGGA TAATCTCAAA CACTACAATG CCGAAAGTCG ACAGCTGACC GTAGAGAGGC TGCATTTCTT TGCCCGCAAC CGCCGACATA TGAAGCAATG GCAGGTGATC CTCTTGGTCG ACCAGAGCGG CTCTATGCTC GACTCCGTCA TCCATTCCGC CGTGACGGCG GCCTGCCTCT GGGGCTTGCC CGGGGTGAAA ACTCACCTCG TCGCCTTCGA CACCAGCGTG GTCGACCTGA CGAGCGATGT CGATGATCCC TGCGAACTGC TGATGAAGGT ACAGCTCGGC GGCGGAACGG ATATCCAAAG AGCGGTCGGC TATGCCGCAG ATCTGATCAC CCAGCCGGAG AATGCGATCG TGATTCTGAT CTCGGATTTC TACGAGGGCG CAAGCGAGGC GATGCTGCTG CAAAGAGTGG CCGAACTGAC GGCACAGCGC ACGCTGGTGC TCGGTTTGGC AGCGCTCGAT TCAGACGCCG AGCCGGCCTA TGACCGGGAG ATGGCGCGTC GTCTGGTCAG CGCCGGCGCC GAAGTAGGCG CCATGACCCC CGGCGAGCTG GCCGGCTGGC TGGCCGCCAA GATCGGACGC TAG
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Protein sequence | MSQAAALDPL TRWRLILGEA SDAACSAAGC TMSGDAMAMD AALDWLYGRD DEDGARNISR QGGRGPSALT TPQWINDIHR LFPKETIERL ERDAIEHYAI DDIVTNPDVL SRAEPNETLL KAVLRTKHLM SPDILVMARK LVQEVVRQLM EKLSREMAVA FSGVVDRRRH SRFKIASDLD FRRVLKDNLK HYNAESRQLT VERLHFFARN RRHMKQWQVI LLVDQSGSML DSVIHSAVTA ACLWGLPGVK THLVAFDTSV VDLTSDVDDP CELLMKVQLG GGTDIQRAVG YAADLITQPE NAIVILISDF YEGASEAMLL QRVAELTAQR TLVLGLAALD SDAEPAYDRE MARRLVSAGA EVGAMTPGEL AGWLAAKIGR
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