| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7539 |
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| Symbol | amaB |
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| ID | 7380077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 482873 |
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| End bp | 484132 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641559 |
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| Product | allantoate amidohydrolase |
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| Protein accession | YP_002539856 |
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| Protein GI | 222102817 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATA TGCAATCCGT CCCCAGCATT GACCGCACAA AGCTGCAAGC CGATTTCGAT
GCGCTGGCAG CCCTGACAGA GCCGGGCCGC CCTTGGACAC GCCGCTCTTT CACGCCCCTG
TTTCTGGAAG GCCGCGCTTA TCTCAAAACC CGCTTTGAGG AGGAAGGTCT GAGTGTTCGT
CTGGATGCCG CTGGCAATCT GATTGGACGA TGGGAGGGCG CTCAACGTCA TGCGCCCGTG
TTGATGACTG GCTCGCACAG CGACACCGTG CCCAGCGGCG GACGGTTCGA TGGTGTAGCG
GGTGTTCTAT CCGGCCTTGC CGCCATTCGG GCGCTGCGGC TTGCCGGTTA TAGGCCGCAA
CACCCCATTG AACTGGTTGA TTTTCTTGCC GAAGAACCAA GTGATTGGGG CCTGTCCTGC
ATCGGCAGCC GTGGTATGGC GGGGGCCTTG ACCGACCATC ATCTTGCTTT GCTTGGACCC
AATGACGAAC CATTGCGCGA GGCGATAGAC CGGATTGGCG GCAATGTCTC ACAGCTTTCC
AGCGCTCGCC GCGATGACAT TTTTAGCTAT CTGGAAATCC ACATCGAGCA AGGGCCGGTG
CTGGAGGCAA AGCACATCCC GATTGGCGTT GTGACTGCCA TTGCCGGTAT TGGTCGCGTT
AAAGTGCGGT TCGAGGGCAT CGCGGGCCAT GCCGGCACCT CGCCCATGGA TATGCGGGCG
GATGCGGCTT TGGCCATGGC GCGGTTTGCG CTCGCAGTTC GCGATGCCGC TTGTGCCATG
CAGGGCAAAG GGCATTTTAC CGCCACCATC GGCGTGCTCA CCATTGAGCC GGGCGGGGCC
AATGTGGTGC CGGGCGCATC CGAGGCCATC GTTGATATCC GCGCCGAAGA CGATGGCATG
ATGGATAGTT TCATTGAGGC GCTGGAGGGA TTGGCCAACA AGGCGGCTAC TGATGAAAAA
TGCCAGGTTG CACTGTTTGA ACGCTTGAGC AAGACGCGGG CCGTTGCCTG TGATTCCTCC
CTTCGAGTGG TTTTGGAAAG TGCTGCCAGC GATCTCAATT TACCCACCCT GTCTCTTGCC
TCCGGCGCTG GCCATGATGC GGCGTTCATG GCTCAGGTCA CCAAATCAGC AATGATCTTT
GTGCCGTCTC GCGATGGCAA AAGCCACACG CCGGATGAGT GGACGGATAA CGAAGCCATC
GCGCTTGCCG CCGATGTGCT CGTTCGCGCC CTTGTCCATC TGGATAGCAA CACGCCTTAG
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| Protein sequence | MANMQSVPSI DRTKLQADFD ALAALTEPGR PWTRRSFTPL FLEGRAYLKT RFEEEGLSVR
LDAAGNLIGR WEGAQRHAPV LMTGSHSDTV PSGGRFDGVA GVLSGLAAIR ALRLAGYRPQ
HPIELVDFLA EEPSDWGLSC IGSRGMAGAL TDHHLALLGP NDEPLREAID RIGGNVSQLS
SARRDDIFSY LEIHIEQGPV LEAKHIPIGV VTAIAGIGRV KVRFEGIAGH AGTSPMDMRA
DAALAMARFA LAVRDAACAM QGKGHFTATI GVLTIEPGGA NVVPGASEAI VDIRAEDDGM
MDSFIEALEG LANKAATDEK CQVALFERLS KTRAVACDSS LRVVLESAAS DLNLPTLSLA
SGAGHDAAFM AQVTKSAMIF VPSRDGKSHT PDEWTDNEAI ALAADVLVRA LVHLDSNTP
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