| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7536 |
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| Symbol | |
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| ID | 7380074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 479986 |
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| End bp | 480963 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641556 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539853 |
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| Protein GI | 222102814 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGACC CGTTGTTGAA CGTCTCCGGC CTGTCCGTCG ATTTTTCGCG TGGGGCTAAG
ATGATGAGGG CCGTTGATAA CGTGTCTTTC TCTTTGGCTC CGGGGGAAAC ACTGGGCTTG
GTCGGCGAAA GCGGCAGTGG CAAAACCACC ATCGGGCGAG CGCTGCTCAG GCTGTTACCG
CAGGCCGACA CCCGATGGAA AGGTGCTGTA GACTATCAAG GCACTGACCT TGCAAAGCTC
TCCAGCGGAG ACATGCGGCG CATGCGCGGC AAGCTGCAAA TGATCTTTCA AGACCCGCTC
TCCTCCTTCA ATCCACGTCG CCGGGTTGAG GATATTGTGG CCGAGGGCTT GGTAATCCTG
GGCGTTGCAA AGCCTGAGCG CGACAGGCGC GTGCGTGCGG CGCTCAAGGA TGTGGGTTTT
GATCTGGATG CTGTTGCGGG CCGCACCCCG CATCAGTTCT CCGGCGGCCA GTGCCAGCGC
ATTGCTATTG CCCGGGCGCT GGCCGTGGAA CCCGAGCTGA TTGTCTGTGA CGAGCCGGTG
GCATCGCTGG ATGTGTCGGT TCAGGCGCAG GTGATCAACC TGTTGCAGGA CATCCGCGAA
ACCCGCAAGC TTGCGCTGAT CTTCATTTCC CATGATCTGG CCGTGGTAAA AAATGTCAGC
GACCGCGTGG CCGTACTCTA CCGCGGCAGG ATCGTTGAGA TCGGCTTGGG CGAGGAGATT
TATGCGCTCC CGGCTCATCC CTATACGCGC ACATTGCTAG AGGCTGTTCC CGTCGTTGAT
GCCAGCCGGA AAGTCACACC TGAGCGCAAG CGTATGGAAG TGCCATCCAG AAACCAGCCG
CTCAGTGGCT GCGCTTTTAG GACCCGATGC CCGCGTGCCA CGGAGCTTTG CGCCAATAAA
GAGCCGGTGC TGCGATTGGC GTTTCGGGGC CAGATGGTTG CCTGTCACCA CCCGCATGAT
GAACCGGTAT CAGCATGA
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| Protein sequence | MVDPLLNVSG LSVDFSRGAK MMRAVDNVSF SLAPGETLGL VGESGSGKTT IGRALLRLLP
QADTRWKGAV DYQGTDLAKL SSGDMRRMRG KLQMIFQDPL SSFNPRRRVE DIVAEGLVIL
GVAKPERDRR VRAALKDVGF DLDAVAGRTP HQFSGGQCQR IAIARALAVE PELIVCDEPV
ASLDVSVQAQ VINLLQDIRE TRKLALIFIS HDLAVVKNVS DRVAVLYRGR IVEIGLGEEI
YALPAHPYTR TLLEAVPVVD ASRKVTPERK RMEVPSRNQP LSGCAFRTRC PRATELCANK
EPVLRLAFRG QMVACHHPHD EPVSA
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