| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7527 |
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| Symbol | |
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| ID | 7380067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 472246 |
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| End bp | 473613 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641549 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_002539846 |
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| Protein GI | 222102807 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACC AATCATGCCG GACCATGATG GCTGTGTTGC AAAAGCAGGG CGAGTTGCTC
ATTGTCGATG AAGAAATCGA TCCCGTTTAT GATCTTTCGG CCCTGCTGTC TTTGACACAC
GAAACACATG CGGTTCGCAT CAACAAGGTC AAGGGATCGG CGTTTCCGGT GTTTGGCAAC
CTTCTCTCAA GCCTTGATCG TATTGCGCTG GCGCTGGATG TTCCACGCGC ATCGATCCAG
TCCACCTTAC TGGCGTCGGT GCAAAAGCCG GTTGCGCCGG TCGTTGTGGA AAATGCTCCT
GTTCAGCAGC AGCGTTTTGA AGAGGGTGTG TTGGCGCGCC TGCCTGTTCC GACGTTTTTC
GACAAGGAAA CCGGCCCCTA TATCAGCGCG GGCATGATGA TTGCCCGTGA TCCGGAAACG
GGCCTTGGTA ATGCCTCTTA CGCACGCCTG AAAATCCTGA GCCCAACGGA AGCGTTGATT
GGCATTGCCC CCAACCATCA TCTGGCCATC ATGGCCCGCA AGGCTGCGGA CAAGGGTGAA
GCCCTTCCGT TTGCCGTAGT TTTGGGTGCT CATCCGGCCA TCCAGCTGGC CGCCTGTCTC
TATTTGGGTC TTGGAGATGA CGAGATGCAT TGCGCCGGTG CGCTGCTGGG TGAGCCGGTG
CGCATGGCCC GTTGCTACAA CAGTGATATT CTGGTGCCTG CTGAGGCCGA GATTGTTATT
GAAGGGCATA TCCATGCCAA TACGCCGATT GTCGAGGGAC TGGTCTCTGA ATATCACGGC
ATGTACGAGG ATTATGGCAG CGGCGTGCTG GCAACGTTTG AGAGCATGTC AGCCCGCGAG
GATGCGATGT TTCAGGTGAT TTTGCCCGGT TATCACGCTG AGCACATTTA TATTGCCGCC
GTTCCCATCG CCGTCAGCCT CAAGGCCCAA CTTGCCCGCG TGATCCTCAA TGTCGGTGAA
GTGGCGGTGA CTGCCTCTGG GTGCGGCCGT ACCAATGTTG TGGTGCAGAT CGACAAGCCG
CGTCCTGGGC AAGCCCGACG CGCCATGGCC ATCTGCTGGG GTGCGGTTTC TATCGTAAAA
TCCGTGACGG TGGTTGATAG CGATGTTGAC CCCTGGGACA TCAACGCCGT TGAACTGGCG
AAATCCACCC GTATGCGGGT GGATCGGGAT ATTCTGATCA TTCCGGGCAT GACTGCGGAT
CGTTCCGAGC CGCAGGAAGA GGCAGGCATG GTGGCCAAGA TTGGCTATGA TGCCACCTGC
AAAGCCGGAG ACCGCAAGGA AGGCTATGAC AAGGCATTGC CGCCGCAAGC GTCTTATGAG
CGCATGAGCC GTGTGATTGC GGCGATCAAG CCGGAGGGCG CGGTTTGA
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| Protein sequence | MSDQSCRTMM AVLQKQGELL IVDEEIDPVY DLSALLSLTH ETHAVRINKV KGSAFPVFGN
LLSSLDRIAL ALDVPRASIQ STLLASVQKP VAPVVVENAP VQQQRFEEGV LARLPVPTFF
DKETGPYISA GMMIARDPET GLGNASYARL KILSPTEALI GIAPNHHLAI MARKAADKGE
ALPFAVVLGA HPAIQLAACL YLGLGDDEMH CAGALLGEPV RMARCYNSDI LVPAEAEIVI
EGHIHANTPI VEGLVSEYHG MYEDYGSGVL ATFESMSARE DAMFQVILPG YHAEHIYIAA
VPIAVSLKAQ LARVILNVGE VAVTASGCGR TNVVVQIDKP RPGQARRAMA ICWGAVSIVK
SVTVVDSDVD PWDINAVELA KSTRMRVDRD ILIIPGMTAD RSEPQEEAGM VAKIGYDATC
KAGDRKEGYD KALPPQASYE RMSRVIAAIK PEGAV
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