| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7520 |
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| Symbol | |
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| ID | 7380063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 466778 |
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| End bp | 467803 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641545 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539842 |
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| Protein GI | 222102803 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0145056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGA CCCCTCACTT GCTGGAGGTG AAAAACCTCA GAACATCCTT CTTCACCGAG
GACGGTGAAG TGAAAGCTGT CAATGATGTT TCCTATCATC TTGATCAGGG GGAAGTGATT
GCCATTGTTG GAGAAAGTGG TTGTGGAAAG TCCATCACCC AGCTTTCTGT GATCCAGCTT
GTTCAATCTC CTCCCGGCAG AATATTGGGT GGCGAGGTCA TTTTCGATGG ACAGTCCTTG
TTGCAATACA AGCCGAAGTC CAAGGAAATG CGCTCCGTGC GCGGGGCGGG AATTGCCATG
ATTTTCCAAG AGCCCATGAC ATCCCTGAAC CCTGTGCTCA CCGTTGGTCA GCAGCTTTCA
GAAGTCATCA AGGTCCATGC CCGTGTGAGC AAGAAACAAG CCTGGCAACG GGGAGTGAAG
GCGCTTGAAG CCGTGGGCAT TCCCGATCCC GCGGCGCGCA TGAAAAACTA TCCTTTTGAG
ATGAGCGGCG GCATGCGGCA ACGGGTGATG ATTGCCACTG CCGTTGCCTG CAATTCCAAG
GTCTTGATTG CGGATGAGCC GACAACGGCG CTGGACGTGA CCACGCAGGC GCAAGTCATG
GAACTGTTGC TGGATTTGGT CGATAGCCAC GGAAAATCTC TGATCATCAT CACCCATAAT
CTCGGGCTGG TATCGCGCTA TGCTAAGCGC GTTTACGTGA TGTATGCCGG AAAGGTTGTT
GAATCCGGCA CAACCGAGCA ATTGCTCACC GCGCCGAAAC ATCCCTATAC CCAAGGGCTT
CTGAACTCGA TGCCAAAACT GGAAGGCAAC AAGAATGATG ATCTTGTTCC CATTCAGGGC
GCTCCACCGC GCTTGAACGG CCTGCCGGAT CAATGTGCGT TTTTGCCCAG ATGTCCGGCC
GCGCAAAGCC GATGCGCTGA TAGTTCTTTT CCGCCCCTGC GAACAGTCGG GGCGCAAGAC
CATACTGCGG CTTGCCACCT TGCTGAAATG GATGCAGACA GACTGATTGC CGGAGTGCGG
ACATGA
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| Protein sequence | MTQTPHLLEV KNLRTSFFTE DGEVKAVNDV SYHLDQGEVI AIVGESGCGK SITQLSVIQL
VQSPPGRILG GEVIFDGQSL LQYKPKSKEM RSVRGAGIAM IFQEPMTSLN PVLTVGQQLS
EVIKVHARVS KKQAWQRGVK ALEAVGIPDP AARMKNYPFE MSGGMRQRVM IATAVACNSK
VLIADEPTTA LDVTTQAQVM ELLLDLVDSH GKSLIIITHN LGLVSRYAKR VYVMYAGKVV
ESGTTEQLLT APKHPYTQGL LNSMPKLEGN KNDDLVPIQG APPRLNGLPD QCAFLPRCPA
AQSRCADSSF PPLRTVGAQD HTAACHLAEM DADRLIAGVR T
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