| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7500 |
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| Symbol | |
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| ID | 7380048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 451681 |
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| End bp | 452448 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643641530 |
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| Product | transposase |
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| Protein accession | YP_002539827 |
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| Protein GI | 222102788 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.302467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TCAAGTGGCG TCATTTTCAG GGCGAGGTGA TCTTGTGGGC AGTTCGCTGG
TATTGCCGCT ATGGGGTGAG CTACCGCGAC CTTGAGCAAA TGATGGGCGA ACGGGGCGTC
GCCGTTGATC ATTCCACGAT TTATCGCTGG GTCCAGAAAT ATGCACCGGA AATCGAGAAG
CGGCTGCGTT GGCACTGGCG GCGGCCCCAA TCAACGAGCT CGCGGGTCGA TGAAACCTAT
GTGAAGGTTC GTGGCAAATG GACATACTTG TACCGCGCCG TTGACAAGTT CGGGAACACG
ATCGACTTCT ATCTGTCACC GACGCGCAAT GCCAAAGCGG CCAAGCGCTT TCTCGGCAAG
GCTCTGAATG GTCTGAAAGA CTGGGAAAAG CCAAGAGTTA TCAACACTGA CAAAGCCCCA
ACCTATGGAA TTGCCATCGC GCAATTGAAA GCTGAAGGCA AATGTCCCGA TGAGCTTGTG
CATCGACAGG TCAAATACCT GAACAATGTC GTTGAAGCCG ATCACGGCAA GTTGAAACAA
CTGATAAAGC CAGTGAGAGG GTTCAAGACG CTGAAAACGG CCTATGCGAC GATTAAAGGT
TTCGAGGTCA TGCGGGCGTT ACGCAAGGGT CAAGCGGCTA TTTTCAACCT TACAAAAGAC
ATCCGCGGAG AGGCCCGCAT CGTTGAACGG GCTTTCGGAC TTGGACCAAG CGCTCTGACT
GAAGCCGCAG CTCTGCTCGC CCAGAATCTC CAAGCTCACA CCGCTTAA
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| Protein sequence | MSDFKWRHFQ GEVILWAVRW YCRYGVSYRD LEQMMGERGV AVDHSTIYRW VQKYAPEIEK
RLRWHWRRPQ STSSRVDETY VKVRGKWTYL YRAVDKFGNT IDFYLSPTRN AKAAKRFLGK
ALNGLKDWEK PRVINTDKAP TYGIAIAQLK AEGKCPDELV HRQVKYLNNV VEADHGKLKQ
LIKPVRGFKT LKTAYATIKG FEVMRALRKG QAAIFNLTKD IRGEARIVER AFGLGPSALT
EAAALLAQNL QAHTA
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