| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7482 |
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| Symbol | amaB |
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| ID | 7380038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 439257 |
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| End bp | 440552 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641522 |
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| Product | allantoate amidohydrolase |
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| Protein accession | YP_002539819 |
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| Protein GI | 222102780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0271426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGG CGGGTAAAGG ACTGTTAGAG GTCAATGGCG AGCGGCTTTT GGCCCGATTG
GACCAATTTG CCGCGATTGG CGCAACGCCC AAAGGCGGTG TTAATCGGCA GGCCCTGACG
GCGCTTGATC GTCAGGCGCG GCAATTGCTG GCCGATCTCG GCCAAACGCG TGGATTTTCT
GTCTATCAAG ATCCGATCGC CAACCTGTTC CTGCGCCGCG AGGGCCAGAA CCCGGATTTG
CCGCCGCTGC TGATCGGCAG CCATCTCGAC AGCCAGCCCT CTGGCGGGCG GTTTGATGGT
GCGCTGGGCA CACTCTGCGC CTTCGAAGTT TTGGAAACAT TGGAAGACAA TGGCATAGAC
ACCGTCAGGC CTGTCGAGGT TGTTGCCTTC ACCAATGAAG AAGGCTGCCG TTTTGCACCC
GGATGCATGG GGTCCATGGC CTTTTCGCAG GGTGCCATTC CCGCCGCATG GCATACAGCG
CGGGCAACGG ATGGCGCGCT GTTTTCCGAT GACTTGGCAG CAACGCTTGC TGATTTGCAA
GGCGCTGCCA TGAGGCCGCT GGGCTTCCCG GTATTTGCTT ATCTTGAAGT GCATATCGAG
CAAGGCCCAT CCTTGGAAAA AGAGGGTCTG CCCATCGGCA TCGTCACGGG CATTCAGGGC
ACCCGCTGGC TTCAGGTGAC CATCTCGGGC CAGACTGCCC ATGCAGGCAC CACAGCACTG
TCCTACCGCA AAGACCCCAT GCGCGCCGCC GTCTCCGGCT TGAACGTGCT TTATAACGAC
ATCATGCCGC AAGATGCCCA TTCACGCCTG ACAGTCGGCC GGTTCTCGCT GGAGCCGGGG
GCCATCAATG CCATTCCGGC AGCGGTGACG TTTTCGCTGG ATATCCGCCA CCCCAATGTT
GAGCAACTGG ATCTGATCGA AGCGAAGATA CGCAAGGTCC TGCAGGATCT TGCCGTGGAG
AATGGATGTG GTCTCGAAAT GGAACTGCTC TTCGATATGG CTCCAGCGCG TTTCCCGGAT
CATCTGGTTA CCATACTGGA GGGTGCGGTT GTTAAGGCTG GTTTTGCCCA TAAATCCATG
GTGTCCGGTG CTTTTCACGA TGCACTCTTC ATCAATCGTG TCGCACCCTC TGCGATGATT
TTCACTCCAT GCCGAGATGG ATTGAGCCAT AACGAAGAAG AGTATGTAAT GCCTGCGGAT
TCTGTCGCAG GGGCGCAAGT GCTGCTGACC GCGAGCTCGC AACTCCTGTC AAACTTGGCG
ACACAGGCAT CTGTCGTTGT CGCTCACCTC CGTTAG
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| Protein sequence | MAQAGKGLLE VNGERLLARL DQFAAIGATP KGGVNRQALT ALDRQARQLL ADLGQTRGFS
VYQDPIANLF LRREGQNPDL PPLLIGSHLD SQPSGGRFDG ALGTLCAFEV LETLEDNGID
TVRPVEVVAF TNEEGCRFAP GCMGSMAFSQ GAIPAAWHTA RATDGALFSD DLAATLADLQ
GAAMRPLGFP VFAYLEVHIE QGPSLEKEGL PIGIVTGIQG TRWLQVTISG QTAHAGTTAL
SYRKDPMRAA VSGLNVLYND IMPQDAHSRL TVGRFSLEPG AINAIPAAVT FSLDIRHPNV
EQLDLIEAKI RKVLQDLAVE NGCGLEMELL FDMAPARFPD HLVTILEGAV VKAGFAHKSM
VSGAFHDALF INRVAPSAMI FTPCRDGLSH NEEEYVMPAD SVAGAQVLLT ASSQLLSNLA
TQASVVVAHL R
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