| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7479 |
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| Symbol | rbsK |
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| ID | 7380036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 437466 |
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| End bp | 438362 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641520 |
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| Product | ribokinase |
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| Protein accession | YP_002539817 |
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| Protein GI | 222102778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.362941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGCCT GGGTAATCGG TAATGTCGCA ATCGATGAAA TCATGTCCGT ACCGACCATG
CCAGAGGCCG GCGCGTCGAT TTTTGGCCAG CAGCAAAGCA CGGATCTGGG TGGCAAAGGC
GCCAACCAGG CGATTGTTCT GGGCCGCGCC GGTTTGGACA CCACGCTGAT TGCCGCTGTC
GGCAACGACC TTCGCGGCTC GATGATCCGG CAGAGCCTGT CGCTGGAGCC GATCGATAGC
CGCTTGATCG AGCTTGTCGA TAAAGCCAGC GATATCTCGA TGATCTTCAC CACGCCGGAT
GGCGAAAATG CCATCATCAC CACAACAGAC TGTGCCACCA GCGTCCGGCC TGAGCATGTT
ACCAGTGTCT TACAGACGGC AAAACCCGGC GATCTGGCCA TTCTCCAAGG CAATCTCACC
GATGACACCA CGGCTGCCCT CCTCCACGAG GCCAAACGCT GCGGCATGAT CACCGCCTTT
AACCCATCAC CGCTGCGGCC CGGCTTTGCC GCCCTTTGGT CGCTGATCGA CATTGCCTTT
TTGAACCAGG GCGAAGCCGA TAAGCTGACA GGTGAAAGCG GCGAAGCCGC CACCCAATGC
TTGCGTGATG CCGGTGTTGG TACCGTCATC ATCACCCTTG GCGGCAAGGG TGCAATCTTG
GCGGATCGCA CCGGCACCAC CACAATCCCA GCCGTTCCAT CCGTTGCTGT TGACACCACA
GGCGCAGGCG ACACGTTCAT GGCGGTTGCG CTGGCATCCA GCAGTTTGCG CCATGTCATG
CCCGATGGCC TGGCGCTGCG CCACGCAGCA CAGGCCGCCA GCATCACCGT CAGTCGCCGG
GGAACCCGGT CTGCGTTTCC ATCACAGACC GAGTTGGCCG CGATCTTCGC CACGTGA
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| Protein sequence | MRAWVIGNVA IDEIMSVPTM PEAGASIFGQ QQSTDLGGKG ANQAIVLGRA GLDTTLIAAV
GNDLRGSMIR QSLSLEPIDS RLIELVDKAS DISMIFTTPD GENAIITTTD CATSVRPEHV
TSVLQTAKPG DLAILQGNLT DDTTAALLHE AKRCGMITAF NPSPLRPGFA ALWSLIDIAF
LNQGEADKLT GESGEAATQC LRDAGVGTVI ITLGGKGAIL ADRTGTTTIP AVPSVAVDTT
GAGDTFMAVA LASSSLRHVM PDGLALRHAA QAASITVSRR GTRSAFPSQT ELAAIFAT
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