| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7476 |
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| Symbol | |
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| ID | 7380033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 434584 |
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| End bp | 435588 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641517 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002539814 |
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| Protein GI | 222102775 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.202333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGCCT ATACTGAACG CGCCAAAGGC TCTGCCTTCG CTGACTTTAT CACCGAGAAT
GCCCAGGTTC TGTCGATTGC GATTTTCTTC TTTGCCTGCA TGGTGTTCTT CTCCGTCACG
ACCGATACAT TTCTCACGCT CGGCAATATT CTCAATGTGG TGCGACAAGC TGCCCCCATT
CTGATTGTTG CCGTTGCCAT GACACTGGTG ATTGTTACCG GCGGTATTGA TCTTTCCGTT
GGCTCGCTGG TGGCGCTGAT CAATGCAACG GTGGCGATTG TGCTGGCAAC CGGCCTGTCA
TGGCCCTTGG TCGTGCTGCT CATGCTGGTT CTGGGCGGCG TGATTGGCCT GATCCAGGGT
TGGTTCATTG CCTATCAGGG CATTCCGGCC TTTATCGTCA CGCTGGCTGG CCTGTCGATC
CTGCGCGGCG TGGCGCTCTA CATCACCCAA GGCTATTCCA TTCCGATCAA CGACGTGCCG
GGATTCTTCA CGCTGGGTCG TGGCGAGTTC TTAAGTCTTC CGGTTCCGGC CCTGATAGCC
ATTGCCGTGA CAGTCTTTGG GTTTGTGTTG GTCTCCTCCA CCAAATATGG CCGTCAAGTG
GTGGCCGTCG GCTCCAATCT GGAAGCGGCG CGCCGGGTAG GCATGCCAGC CAAGTGGATT
GTCGCTTCAG TCTATCTGGT GTCCGGCGTG GCTTGCGCCC TTGCCGGATT GTTGATTGCC
GCCCGGCTTG GCTCCGGCTC TTCCAACGCC GCCGTCGGCT TTGAATTGCA GGTGATTGCG
GCCGTGGTTC TGGGTGGCAC GTCGCTGACG GGCGGGCGCG GCACCATGCT GGGAACACTG
CTGGGCACCA TGACCATCGC GGTGATCGGC AACGGACTTA TTCTCATGCA TATCTCGCCG
TTTTTCACGC AGATTGTCAC GGGCGCGATC ATTCTGGTGG CGATCTGGCT GAACACCCGG
ATCTTTTCCG CAAATTTCCG CTTTGGCGCA GCGAAGAAGG GGTGA
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| Protein sequence | MTAYTERAKG SAFADFITEN AQVLSIAIFF FACMVFFSVT TDTFLTLGNI LNVVRQAAPI
LIVAVAMTLV IVTGGIDLSV GSLVALINAT VAIVLATGLS WPLVVLLMLV LGGVIGLIQG
WFIAYQGIPA FIVTLAGLSI LRGVALYITQ GYSIPINDVP GFFTLGRGEF LSLPVPALIA
IAVTVFGFVL VSSTKYGRQV VAVGSNLEAA RRVGMPAKWI VASVYLVSGV ACALAGLLIA
ARLGSGSSNA AVGFELQVIA AVVLGGTSLT GGRGTMLGTL LGTMTIAVIG NGLILMHISP
FFTQIVTGAI ILVAIWLNTR IFSANFRFGA AKKG
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