| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7472 |
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| Symbol | |
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| ID | 7380030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 431762 |
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| End bp | 432781 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641514 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002539811 |
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| Protein GI | 222102772 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGG AACGGGTCAC TGGGCTAAAG GATGTTGCCG CCGCCGCTGG CGTGTCGGTG
ACCACCGTGT CGCGCATGCT GAATGGCTCG CTCGATCTTC CCGGCGAGAC GCGCAAGCGG
ATTGAAGACG CCATTGTTGC GCTCAAATAT CAGCCAAATC CGCATGCAAG ACGTCTCAGC
CGTGGCCGCT CGGACACCAT CGGTCTTGTC GTGCCGGATA TTGCCAATCC GTTCTTTGCA
ACTCTGGTGG CCGCTGTTGA AGAGGAAGCA GATCTGCGCG GTTTGGCGCT ATCGCTTTAT
GCCACGCTAA ACCGCCCGGG CCGCGAAATG GCATATCTCA GTCTGCTGGA GCGCAACCAT
GTGGATGGCC TGATCTTTAT CACCAATCAC CCTGACCAGG GTGAGCTGGC GGCGATCATC
AATCGCACTG GAAAAGTGGT TGTGGTCGAT GAAGACGTGC CGGATGCGAC GGTGCCAAAG
CTGTTTTGTG ACAACCGGCA AGGCGGAGAA CTGGCCGGGC AACATCTGGC CGGTTTTGGC
CATAGCCATG TTCTCTACAT CGGCGGGCCG GATGTGATGA TCAGCACCGA GCGCCGCTTT
ACCGGCTTTG AAGCCGCCAT GCGCGCCAAG CACGGTGAGA ATGCTGTGAT TGAGCGCTAT
TGCGGCGATT ATACCGCCGA GTTTGGCAGA CAGGCCGCGC GGCGTTTTCT GGAGGGAGGC
CGCGAGGCGA CCGCAATTTT CGCCAGCTCC GACGAAATCG CCATCGGTGT CATTGAAGTG
CTGCGAGCGG AAGGGATCTC CATTCCTGAG CAGATTTCCG TCATCGGCTT CGATGATGTT
GGACCTTTGC ATCTTTTTGC CCCGCCGTTG ACGGCCATCC GTCAGCCGGT GCGGGGAATG
GGAAGCCGTG CTCTTTCGCT GCTTCTCGAT ACGGATTGGC AACAGCCTGC GAAAGCATCG
GAGGAATTGC TGCCAGTGGA AATCGTCGTG CGGAACTCCG TTGCACCGCC TGCGAAATAA
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| Protein sequence | MVKERVTGLK DVAAAAGVSV TTVSRMLNGS LDLPGETRKR IEDAIVALKY QPNPHARRLS
RGRSDTIGLV VPDIANPFFA TLVAAVEEEA DLRGLALSLY ATLNRPGREM AYLSLLERNH
VDGLIFITNH PDQGELAAII NRTGKVVVVD EDVPDATVPK LFCDNRQGGE LAGQHLAGFG
HSHVLYIGGP DVMISTERRF TGFEAAMRAK HGENAVIERY CGDYTAEFGR QAARRFLEGG
REATAIFASS DEIAIGVIEV LRAEGISIPE QISVIGFDDV GPLHLFAPPL TAIRQPVRGM
GSRALSLLLD TDWQQPAKAS EELLPVEIVV RNSVAPPAK
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