Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7454 |
Symbol | |
ID | 7380477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 420492 |
End bp | 421757 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641505 |
Product | transcriptional regulator ROK family |
Protein accession | YP_002539802 |
Protein GI | 222102763 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACTTC TGGATCGGTT TGATGGAGGC TTTGCCCGCG ACGGTGAGGA CATTATTGCG GGCAGCCGGA TTGAAGATGC CCGCATTCAC AATCGTCGTC TGGTGTTTGA AACCATTTTT CAACGCGGCC CCATCAGTCG GGTGGAGATT TCAGCCATTG TCGGGCTGAA ACCCCAAACC ATTTCGTCCA TCACCCGCGA ACTGCTCGAG CAGGAATTGA TCGTCGAGGC CGGACGGTCC TCCGGTCTTC GCGGTCAGCC GCAAATCTAT CTGGAGGCCA ATGCCGAAGC GGGCTTTTCA ATCGGGGTTC ATCTGGATCA GAACCAGTGT CATATTCTGG TGTTTGACCT GAAACGGCAA GAACGCGCCC GCAAATCGAT GCGGTGTGAT ACGGCAAACC CCGATGTGAC CGTGCGGATG CTGGCGCAAA CCATAACAAC ATTGCTGCAC GACAATGCCC TGCCTGCTGA ACGGATCTGG GGCCTTGGTC TGGTGCTGCC CACATTCGGC TCCGATGTCT ACGATTTCGA TTTTTCCATG CGGCATTGGG AGGCCTGGCG CGATGCATCC TTTGCCGAAG ACCTGCAACG CCTGACCGGC TTTGCCGTTC TGGTGGAAAA TGACGGAACA GCGGCAGCCA TTGGCGAGCG CCTTCACCGC CACGATGCAC AGGAGGCGTC GTTTGCCTAT TTCTACATCG GCCATGGTGC CGGTGCCGGG CTAATTATTG ATGGCTATCC CTTCAAGGGT GTTGGCGGAA ATGCCGGCGA AATCGGGCTG TTGCCAATCC TTGGCCTTGG CGCCAATCCG GTCTGGCCGG ACAATCCCAG CAGCGCTGTT CAGGGCGGTG TTCTTTCTAT TGGCGGGCTG GCAGCCGCTT GCGGTCTATC AGAGCAGTCC ATGGATGAGC AGAGCATCTT GAGCCTGCTG GAGCGGCGTG ATCATCGGTT GATGGATTGG CTGGCGTCTG CGGCCAGTGT ACTGCGTGAT GTCTGCGCAG TCATTGAAGT GATGTTCGAT CCCGGCTTTA TTGCCGTGGG CGGTGCGTTG CCACGGGCGC TGGTGGAACG GCTGGTGGAT CGCGCCTATC CGCTGCGCCC CACGCCATCG GCTCGGCGTG ACCGGGCCTT GCCTCGGCTT TTGCCTGCAA CGCTGATTGA GGATGCGGCG GTGACAGGGG CCGCGATGTT GCCGATTTTT GTCACCACCA GCCATAATTT CCGCCATCTC TATTTCCGGC AGATTCTCGC AGACGACCGG TCATGA
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Protein sequence | MTLLDRFDGG FARDGEDIIA GSRIEDARIH NRRLVFETIF QRGPISRVEI SAIVGLKPQT ISSITRELLE QELIVEAGRS SGLRGQPQIY LEANAEAGFS IGVHLDQNQC HILVFDLKRQ ERARKSMRCD TANPDVTVRM LAQTITTLLH DNALPAERIW GLGLVLPTFG SDVYDFDFSM RHWEAWRDAS FAEDLQRLTG FAVLVENDGT AAAIGERLHR HDAQEASFAY FYIGHGAGAG LIIDGYPFKG VGGNAGEIGL LPILGLGANP VWPDNPSSAV QGGVLSIGGL AAACGLSEQS MDEQSILSLL ERRDHRLMDW LASAASVLRD VCAVIEVMFD PGFIAVGGAL PRALVERLVD RAYPLRPTPS ARRDRALPRL LPATLIEDAA VTGAAMLPIF VTTSHNFRHL YFRQILADDR S
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