| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7450 |
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| Symbol | |
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| ID | 7380473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 416575 |
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| End bp | 417717 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641501 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_002539798 |
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| Protein GI | 222102759 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGC AACGACGTGA ATTCCTGAAA TATTCTGCGA CGGGTGTTGG TCTGGCTGTG
GCTGGTGCAA GGCCCGCCTT TGCGGCCCCC GGTGTTCTCG ACATATTCTT CAACAGCGAT
ACCAATGTCA TTGATTTCTG GACCCAGGTG ATCAAGCCGG GTTTTGAGGC GGCCCATTCC
GGTGTGACGC TCAATCTTGT TCCGGGCGGT GGCGGTTCCG CGATGAATTC TCTGGCTGAT
CGCGCTATGG CCGCCTTCAA AGCCAAGAAG GACCCACAGG TCGATATGCT GGAAGCTGTA
ACCCCGTTTT ATCCCACAGG GTCGCTGGAA GCCGGTCTCT GGGTGGATTT TTCCAAGGCT
GGCCTGTCCA ATTACGACAA GGTCAACCCG GTCGTGGTGC AAAGCCCGGC GCTTTTGCCC
TATCGCGGCT CGCAAGTCGT GATGATGTAT AATGCCGACA AGGTCAAAGC CGTCCCCACC
ACCTTCAAGG AACTTGTGGC GTGGATCAAG GCCAATCCCG GCCAGTTTGC CTATGCTCGT
CCTGATCTTG GCGATTCCGG GGCATGCTTT ATCGAGCGTG CGCTTCAGGA AGTCACCGGT
CTGAACCCTG ATCTGTTCCT GCCGGAAAAT TACACCCCGG CCTATGCCGA GCCGCTGTTT
TCCAAGCTCT GGCCTTTGCT CAAGGATATT CAGCCATCGC TGTTCAATGG CGGTGAATAC
ACATCCGGTA ACACAGCGTC CATCCAGATG CTGGCCAGTG GTGCTGTTTC CATGACCGTT
GCCTGGTCAG ACATGGCCTT GCAGGCGATG AGCCAGGGCG TGGTGCCTGA GACAACATCT
GTTGCGCAGT TGCAGGATCT GGCGTTTACC GGCGGCTTCT CCGGCATTGT TGTGCCAACG
GTTGCGGCCA ACAAGGATAT GGTGCTCAAA CTCGCTGATT ACCTGATCAC AGCGGACATC
CAGAACCACG TTGTGACCGA CCTTGGCGGC TTCCCAGGCA TCAAGTGGGA GTTCATGTCC
AAGGAACTTC AGGATAAATT CGCAAAAGTC GCGCCCAAAT CCATCCCGCT TTTCCCCGGC
ACATGGGAGC CTGCACTGTT TGAGGGCTGG TATCGTAACG TCGCATCGAA CATCAAACGC
TGA
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| Protein sequence | MPMQRREFLK YSATGVGLAV AGARPAFAAP GVLDIFFNSD TNVIDFWTQV IKPGFEAAHS
GVTLNLVPGG GGSAMNSLAD RAMAAFKAKK DPQVDMLEAV TPFYPTGSLE AGLWVDFSKA
GLSNYDKVNP VVVQSPALLP YRGSQVVMMY NADKVKAVPT TFKELVAWIK ANPGQFAYAR
PDLGDSGACF IERALQEVTG LNPDLFLPEN YTPAYAEPLF SKLWPLLKDI QPSLFNGGEY
TSGNTASIQM LASGAVSMTV AWSDMALQAM SQGVVPETTS VAQLQDLAFT GGFSGIVVPT
VAANKDMVLK LADYLITADI QNHVVTDLGG FPGIKWEFMS KELQDKFAKV APKSIPLFPG
TWEPALFEGW YRNVASNIKR
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