| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7446 |
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| Symbol | |
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| ID | 7380472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 413058 |
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| End bp | 416144 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641500 |
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| Product | alpha-D-mannosidase |
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| Protein accession | YP_002539797 |
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| Protein GI | 222102758 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCCT ATCGAGACCG CCAGCGTAGC CTTGAACAGC TCTCGCGTCA CATCGAAGTT
TGGGCCGATG AACTGGAAGC GTATGAGCTA CGCGAGCGCA TACCCCTTGG GGCTTTCCTC
GCCAGCACGC CGGAAGGGCT GACGACGCAC ATGGGTGTTG GTGACGCGTG GCCAAACCGC
CATGGCATTC ACACGTTTCT GCTGGAAGAC GCAATTATGA TACCAGAAGA ACCCGGCGTG
GAGCTGCGGC TTGATTTTGG TGGTGAAAGC CTTGTGCGGC TGATTGGGCT GGATGGCGAG
ATTCTCGAGA GTTTTGCGGC TAACCCCTGT CATCGCAGGT TTGATGTCCC CCGCGGCATT
CCCTTCAAAA TCAGAGCGGA ATCCGCCGCG CGCAGTCTGT TTGGCGTGCC CAATCGCAAC
CCCGTGCTCT CCATGGCCGA GATTTATCGA TATTATCCCG AAATTCGCGC CTTGCGCCGT
CGCCTGCTGA TTTTACGCAA CACCGCCGAC ACGGTGAAAG ACAAAGAGCT TGCCCGTACG
CTCTATGAAG CGGCAGAAAT TGTTCTCTCA GGTTTGCGGC TGCCGACAGC AACACAGGAT
GTCGGCCCTC GTCTGGCCAG CCGCACTTGG GCGCGCGATA TATGGGAGCG CAGTTTTGAG
CCGACCGACA TACCAAACGC CCTGACGCAG GAAGCGCTTG CTTCTGTTGA GACGGCAACC
GTCAGGCTTG ATGCCATGCT GACTGAGCTT CGAAATGCCT ACCCGAAACA GGGGCGCGTG
CTGGTGACTG GTCACGCCCA TATTGATTAT GCCTGGCTTT GGCCGCAGCC GGAAACGGTG
CGAAAAATCG TCAGAACCTT CAACAGTGTC AACGCATTGC TCAAGCGGCA CGATGATTTT
CGTTTTCTGC AATCGTCCTC CCTTTACTAT CAGCATGTTG AGCAAGAAGA CCCGGCGCTG
TTTGAAGAGA TCAAACAGCG TGTCTCGGAA GGCCGTTGGG AAGTCATCGG CGGCATGTTG
GTGGAGTGTG ATACCAACAT GCCCTCGGCA GAGGCCTTTT TGCGGCAGTT TCTGCATGGG
CAGCGCTATT TTCAAAAGCA CTTCGGCATC ACCAGCCGCA CGGCGTGGCT GCCCGATACA
TTTGGCTTTA CCGCCGCCAT GCCGCAGATC ATGCGGCACG CGGGCATCGA CACATTGGTG
ACAATCAAAG TATCGTGGAA TGAGACCAAC AGCCTGCCAG ACAATCTTTT CCGTTGGCAG
GGCAATGATG GCTCGCGGGT GCTGGTTCAC ACATTCGACG CCTATGACAA TGACGGCTAC
AATATGCTGA TGACCCCCGC CGCCCTGTGC GAGGTATGGG GCAAACATGT CGCCAAGGAT
ATGACCGACA CCGTCATTGC CTCCTACGGC TGGGGCGATG GCGGCGGTGG GCCGGACCCG
GATCAGATCG AAACCCTGCC GCTTCTCAAT CTCATGCCCG CCATTCCTAC TGTCGAGCAT
GGAGCCATAG AGCCGCATAT TCAGGCCTTG GCAATGGATC TTGAAGCGGC GGCCCTGCCT
GTCTGGCGTG GCGAGCTTTA TCTGGAATAC CACCGGGCAA CATTGACCAC GCAGGCGCGC
ACCAAACAGC TCAACCGACA GGCGGAAGCC ACTCTGGTGG CCGCAGAAGC CATCTCCGTT
CTGGATGCAT TGGAGGGCGG AGCGCCTGCC GTGAACAATC TGGAACCGCA GTGGGAATTG
CTGCTTCGAA ACCAGTTTCA CGACATTTTG CCGGGTTCTT CCATCCGCGA GGTCTATCAG
CAAACCGAGC CAGAGCTGGA GGGCGTCATC GATGATGCAA CAACCCTGAT CCAGACCCGC
CTGCAAGCCA TTGCGGCACG CCATAGCGGT GATCTTGACG GATTGCTGGT GGCCAACCTG
TCAGGCTCCA GAAAAACTGC GTTTCAGATT GAAAGCGCAA GCCCCCTGCC CGCCGCCTTG
CAAGCGCAAG AGCTGAACGG GCGCTATGTT GCGGCCATTG AGCGTAATCT GAAGCCACTC
AGTCTCGGTT TTGTCAGCAG TTCAAGCCCG CGCCGTGTAA CAACGGACGG CAAAACCATG
GAGAATGATT TTGTCCGGCT GACTCTGGAT GAAGCAGGCC GAATTATCAG CCTGATCGAC
AAGAGATCAG ACCGTGAGCT GATGGACGGC CCCGGCAACC AATTGCTGCT GTATCGCAAT
GATCTGCCGC GCAATTTCGA CGCCTGGGAC ATTGAGCCCG GCTTTGAGCT TGGTGAAGAG
GAATGGCTGT CGCTTGAAAC GATGGAGGTG ACGGCCAATG GCCCGCATCT GGCAGAAATC
ACCATCACCA GACGCTTTTC AGCCAGCATG ATCCGGCAAA AAATCCGGCT GTGGTCCAAC
AGTCCACGGA TGGAATTCGT CACTGATCTC GATTGGCACG ACCGGCGCAC CTATCTGCGT
GCAGCCTTCC CCGTCACCGT ACTGGCAGAG GATGCTGTGT TCGATCAGGC CATTGGCATT
ACCCGCAGGC CTACGCATGA CAATACCAGC TGGCAGAAAG CCCAGTTCGA ATCCTGCGGG
CATCGCTTTG TGTCACTCTC GGAAACAGAC TGGGGTGCTG CCCTGCTCTC GGCTGACAAA
TATGGCTTTT CTGCCAAGGG CAACCGGCTG ACACTGAGCC TTGTTCGCGG CCCCATGTTT
CCTGATATGC TGGCCGACGA AGGTCACCAC CACTTCGTTT ACGCCCTTTT GCCGCATGAT
GGCCGCTGGT GGAGCGAAGA GGTTCAGGCG GAGGCTGATC TCGTCAATGC GGGCCTGCAT
TTCACGCCAG CCACCGCCAC TGAAAACTAC GATATCGCAC CCATCGGGTT TTCCGGTCAA
AGTGTTCGTG TGCATGCCCT CAAGCCCGCG GAAGATGGGG AAGGACATGT CCTGCGCCTG
TCGGAGTCAG CTGGCCGTCG CGGGGCGTTT CATTTGGCAC TGCCAGGCGG CTGCAAGCCA
ACCCTAATCA ATGCCATTGA GGTGCCGCTT GATGACATGG ATGATCCCTT AAGCCGTCCT
TTCGGTCTCG CAAGCTTCCT CTTTTGA
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| Protein sequence | MRAYRDRQRS LEQLSRHIEV WADELEAYEL RERIPLGAFL ASTPEGLTTH MGVGDAWPNR
HGIHTFLLED AIMIPEEPGV ELRLDFGGES LVRLIGLDGE ILESFAANPC HRRFDVPRGI
PFKIRAESAA RSLFGVPNRN PVLSMAEIYR YYPEIRALRR RLLILRNTAD TVKDKELART
LYEAAEIVLS GLRLPTATQD VGPRLASRTW ARDIWERSFE PTDIPNALTQ EALASVETAT
VRLDAMLTEL RNAYPKQGRV LVTGHAHIDY AWLWPQPETV RKIVRTFNSV NALLKRHDDF
RFLQSSSLYY QHVEQEDPAL FEEIKQRVSE GRWEVIGGML VECDTNMPSA EAFLRQFLHG
QRYFQKHFGI TSRTAWLPDT FGFTAAMPQI MRHAGIDTLV TIKVSWNETN SLPDNLFRWQ
GNDGSRVLVH TFDAYDNDGY NMLMTPAALC EVWGKHVAKD MTDTVIASYG WGDGGGGPDP
DQIETLPLLN LMPAIPTVEH GAIEPHIQAL AMDLEAAALP VWRGELYLEY HRATLTTQAR
TKQLNRQAEA TLVAAEAISV LDALEGGAPA VNNLEPQWEL LLRNQFHDIL PGSSIREVYQ
QTEPELEGVI DDATTLIQTR LQAIAARHSG DLDGLLVANL SGSRKTAFQI ESASPLPAAL
QAQELNGRYV AAIERNLKPL SLGFVSSSSP RRVTTDGKTM ENDFVRLTLD EAGRIISLID
KRSDRELMDG PGNQLLLYRN DLPRNFDAWD IEPGFELGEE EWLSLETMEV TANGPHLAEI
TITRRFSASM IRQKIRLWSN SPRMEFVTDL DWHDRRTYLR AAFPVTVLAE DAVFDQAIGI
TRRPTHDNTS WQKAQFESCG HRFVSLSETD WGAALLSADK YGFSAKGNRL TLSLVRGPMF
PDMLADEGHH HFVYALLPHD GRWWSEEVQA EADLVNAGLH FTPATATENY DIAPIGFSGQ
SVRVHALKPA EDGEGHVLRL SESAGRRGAF HLALPGGCKP TLINAIEVPL DDMDDPLSRP
FGLASFLF
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