| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7443 |
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| Symbol | |
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| ID | 7380471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 411297 |
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| End bp | 412133 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641499 |
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| Product | dioxygenase |
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| Protein accession | YP_002539796 |
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| Protein GI | 222102757 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.544138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTACT TCGTGGAGGA GGATTCGGTC GCTATCGTCA ACGCCCGCAT GGGTAACGAT
ACGAACCCGA GATTGGCTGA AATCATGTCG GCGCTGGTCA AGCATCTGCA TGCCTTCGTC
AAGGATACCC GGTTGACCTC TGAGGAGTGG GAGATCGCCA TTGGCTTCCT GACCAAGACC
GGCCAGATCT GTACGCAAGA GCGGCAGGAG TTTATTTTGC TATCCGATGT GCTGGGCTGC
TCCATGCTGG TGGATGCCAT CACCAATCGC CGTCCCAAAG GTGCCACGGA AAGCACGGTG
CTTGGCCCAT TCCACGTTGA AAACGCCCCT ATTCGCGACC ATGGCACTGT GATCAGTCTG
GATGGCAAGG GTGAGAGCTG CCTGTTCGAA GGCCGCATTC TCGACCTTGA TCACCAACCG
ATTGAGGGCG CATGCGTTGA TGTCTGGTCG GATAACGCCG ATGGCTTCTA TGATGTCCAG
CAGCCTGACA TCCAGCCGAA GTGGAACAAC CGCGGTCGCT TCATCACAGG GGCCGATGGC
AGCTATCGCT TTGTGGGCAT CCGTCCGGTG AGTTACCCGA TCCCTGATGA CGGGCCGGTT
GGCGCACTGC TGGAACACCT CGGCCGTCAC CCTTGGCGGC CCGCGCATAT GCATTACATG
ATCAGCGCAC CCGGCTTTCG CAAGCTGGTC ACCCATACCT TTGTCGGCGG CGATGAATAT
CTTTCCTCCG ATGCGGTGTT CGGGGTGAAG GAAACGCTCG TTGCTCCCTA TGAGCGACTT
CAGGATGCTG CAACCCTGTG GCGATCACCT TTTGACTTCG TGCTAACACC AGAATGA
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| Protein sequence | MNYFVEEDSV AIVNARMGND TNPRLAEIMS ALVKHLHAFV KDTRLTSEEW EIAIGFLTKT
GQICTQERQE FILLSDVLGC SMLVDAITNR RPKGATESTV LGPFHVENAP IRDHGTVISL
DGKGESCLFE GRILDLDHQP IEGACVDVWS DNADGFYDVQ QPDIQPKWNN RGRFITGADG
SYRFVGIRPV SYPIPDDGPV GALLEHLGRH PWRPAHMHYM ISAPGFRKLV THTFVGGDEY
LSSDAVFGVK ETLVAPYERL QDAATLWRSP FDFVLTPE
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