| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7436 |
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| Symbol | |
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| ID | 7380464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 403913 |
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| End bp | 404638 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641492 |
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| Product | ABC transporter |
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| Protein accession | YP_002539789 |
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| Protein GI | 222102750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGACCA GTCTGCTCGA AACACGCGGC CTCACGGCAT TCTACGGCGA CTTTCAGGCT
CTGTTCGGCG TCGATCTCAG GCTGGACGCC GGAGAAATGA TTGCGGTGAT TGGGGCCAAT
GGCGCTGGAA AGTCCACCTT GATGCGTGCC ATTGTCGGGG TGCTGGCGTC TGAGCCAGAC
GCCATCCTGC ACCAAGGCGT GTCCATCGGT GCATTGGCGG CACCCGATGT GATGGCCCGT
GGCATTGCGC TGGTGCCGGA AGGGCGCAAG CTTTTCCCCT CGCTCACCGT CGAGGAAAAT
TTGCTGATCG GCCAATATGG CCGCACGGTC AATGGCCCAT GGTCGCTTGC CAGTATTTAC
GAGCTTTTCC CGATATTGCA GGAACGCCGC CACAGACCTG CGACAGCGCT TTCCGGTGGT
CAACAGCAAA TGGTTGCGAT TGGCCGGGCG CTGATGTCCA ATCCCGAGGT CCTGTTGTGC
GATGAGCTGA GCCTTGGCCT TGCCCCGGTG GTGATCAAGG ATATCTATGC CGCATTCCCA
CGCATCCGCG CCGCAGGTGC TGCTATCATC ATTGTCGAGC AAGATATTGG TCAGGCGCTG
AAACAGGCAG ATCGCGTCTA TTGCATGATG GAGGGCCGCA TCACACTGAC GGGCCGCCCG
TCCGATCTCG ATCGCAACGA CATTCATGCC GCGTATTTCG GAGCCGAATC CCATGAACTG
GCTTGA
|
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| Protein sequence | MMTSLLETRG LTAFYGDFQA LFGVDLRLDA GEMIAVIGAN GAGKSTLMRA IVGVLASEPD
AILHQGVSIG ALAAPDVMAR GIALVPEGRK LFPSLTVEEN LLIGQYGRTV NGPWSLASIY
ELFPILQERR HRPATALSGG QQQMVAIGRA LMSNPEVLLC DELSLGLAPV VIKDIYAAFP
RIRAAGAAII IVEQDIGQAL KQADRVYCMM EGRITLTGRP SDLDRNDIHA AYFGAESHEL
A
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