| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7434 |
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| Symbol | |
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| ID | 7380463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 403063 |
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| End bp | 403926 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641491 |
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| Product | ABC transporter membrane spanning protein (branched chain amino acid) |
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| Protein accession | YP_002539788 |
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| Protein GI | 222102749 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTGGC TTGATACCAT TCTGCAAGGC GCGCTGCTGG GCGGCCTCTA CGCGCTGTTT
GCCGCAGGTC TCAGTCTGGT CTTCGGCATT ATGCGACTGG TCAATCTTGC GCATGGCGAC
CTGATTGTCC TCGCCTCTTT CCTGATCCTG ATGCTCGCCA ATACCTTCGG GATCAACCCG
TTTCTTGCAG CCCTGATTGC CATCCCGCTG ATGTTTGGGC TTGGCTGGCT GTTGCAGACC
TATCTTTTGA ACCGCACACT CGGCAAGGAT ATCCTGCCGC CACTGCTGGT CACGTTCGGC
CTCTCCATCG TGATCCAAAA TGGCCTTCTG GAAGGCTTCA CCGCCGATAG TCGTCGTCTT
TCGACAGGCG TTTTGGAAAC CGCATCGCTG CCTTTGGCGG GACTGAACAT CGGTATCATG
CCGCTTTTGA CGTTCGGATC GGCGATCATC GTCATTATCG CGCTCAACCA GTTGATCTAT
CGTACCTCGC TTGGTCGGGC ATTTCGGGCC ACATCCGATG ATCCGGTGAC AGCTGGCATG
ATGGGCGTGC GGCCGCACCG TATCTTTGCC ATGGCAACAG GGCTTGCCAT GGTTGTGGTC
ACAATCGCGG CTCTTTATCT CAGCACCCGC GCCAATTTCG ACCCCACCGC TGGGCCATCG
CGGCTGATCT ATGCCTTCGA GGCGGTCATC ATTGGCGGAC TCGGATCACT GTGGGGCACA
CTGGCGGGCG GTGTTGTTTT GGGTATCGCT CAAACGCTCG GTGCAGCCAT CAATCCCGAA
TGGCAGATTT TGGCAGGCCA TATCGCCTTC TTGATCGTGC TTCTGGTCAG GCCACGCGGC
TTGTTTCCCC GCGCCAATGA TTGA
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| Protein sequence | MNWLDTILQG ALLGGLYALF AAGLSLVFGI MRLVNLAHGD LIVLASFLIL MLANTFGINP
FLAALIAIPL MFGLGWLLQT YLLNRTLGKD ILPPLLVTFG LSIVIQNGLL EGFTADSRRL
STGVLETASL PLAGLNIGIM PLLTFGSAII VIIALNQLIY RTSLGRAFRA TSDDPVTAGM
MGVRPHRIFA MATGLAMVVV TIAALYLSTR ANFDPTAGPS RLIYAFEAVI IGGLGSLWGT
LAGGVVLGIA QTLGAAINPE WQILAGHIAF LIVLLVRPRG LFPRAND
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