| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7413 |
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| Symbol | |
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| ID | 7380446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 385841 |
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| End bp | 387226 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641474 |
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| Product | ScoB |
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| Protein accession | YP_002539771 |
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| Protein GI | 222102732 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit
[TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.811733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAAGG TCTTCGAAAG TACCAGTGAC GCTGTTGCGG ATATCAAGGA CGGCGCATCG
ATTGCAATTG CTGGCTTTGG CGTTGGCCAT TCCTATCCCA ACAGCCTGGT GTTGGCGTTG
CAGGCACAAG GGGCCAAGAA TCTCGCCATC ATCGCGAATT CTCTGGGGGC GGGAGGCGAT
TTTCGCCCGC AGATCCTGGT GCAGAACGGT CAGGTAAGCA GGCTTGTTCT GTCTTTCTCC
GTCCGCCCGG GCATGCCTTC GCCGGAAGAG GAAAAGATTG CGGCAGGCGA GATTGCACTT
GAAATGGTGC CACAGGGCAT TCTCGTGGAG AGACTGCGGG CGGCGGGTGC CGGTTTGCCT
GCTTTCTATA GCCCCGTCAC TGTCGGAACT CCTCTCCAGG AGGGCAAGGA AGTACGGCGC
TTTGGCGAGC GGGATTATGT TCTCGAACAT GCTCTGCCCG TTGATGTTGC GCTGATCCGT
GGATACCGCG CTGACCGTTT CGGCAATGTC GAATTTCGCG GCAGCAGTGC GCATTTTCAT
GCCAGCTTTG CCAGGGCGGC GAAATTGACC ATCGTTGAGG TGGAGCACAT TGTTGAAGCT
GGCGAAATCT CGCCCGAACG CGTCGGCTTG CCGGGGATTT TTGTTTCGCG CGTCGTGCAG
ACGGTCGCCA AATATCCGGC CCCTGCGGGC CGGATGGGCC GCCGTGCGCC AGAGAGTGGG
CGGGAATATT TCGGCAAACC AGCCTTAACC CGGACGAATA TGGCAAAGCG TGCTGCTGCA
CTCTTGCCTG AAGGTGCCTA TGTCAATCTT GGCTCAGGCC TGCCCACGCT GGTCGCTGCG
CACACACAGG ACAAATCCAT CTTTCTTCAC GCGGAGAATG GGGCTCTCGG TTACGATCTG
CTGCAGGATC CTGCCCAATT CGACGTCGAT TTTTTCGATG CGGCAGGAAA CTTCATCAAA
ATGCGACCCG GTGGTGCCGT GTTTGACAGC GTAGCCTCCT TCGAAATTGC GCGATCAGGA
AAGCTGTCGG CGATCCTTTT GGGGGCCTAT CAGGTCAGTG AAAAGGGTGA TCTGGCCAAT
TGGGCCGTAC CGGGCCAGTC CGGTGGGGGC ATTGGCGGCG CTATGGATCT CGCGTCGTCC
GGGAGCAAGG TTATCGTTCT CATGGAGCAT TGCGATGGCA AGGGTAAGCC AAAGTTTGTG
CGTAAATGTT CCTATCCGCT CACCGCGCTT GCGTGTGTCG ATACGGTGGT AACTGACCTG
GCGCTGCTGG TGCGTCAGGG AAATAGCTTC GAGGTTACCG CGATTGCTGA AGGATTCACG
CCAGATGAAA TTCGTGCGCT AACCCCGATC GACATCACGT TTGCGCAATC ACTCGAGGTG
ATGTGA
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| Protein sequence | MNKVFESTSD AVADIKDGAS IAIAGFGVGH SYPNSLVLAL QAQGAKNLAI IANSLGAGGD
FRPQILVQNG QVSRLVLSFS VRPGMPSPEE EKIAAGEIAL EMVPQGILVE RLRAAGAGLP
AFYSPVTVGT PLQEGKEVRR FGERDYVLEH ALPVDVALIR GYRADRFGNV EFRGSSAHFH
ASFARAAKLT IVEVEHIVEA GEISPERVGL PGIFVSRVVQ TVAKYPAPAG RMGRRAPESG
REYFGKPALT RTNMAKRAAA LLPEGAYVNL GSGLPTLVAA HTQDKSIFLH AENGALGYDL
LQDPAQFDVD FFDAAGNFIK MRPGGAVFDS VASFEIARSG KLSAILLGAY QVSEKGDLAN
WAVPGQSGGG IGGAMDLASS GSKVIVLMEH CDGKGKPKFV RKCSYPLTAL ACVDTVVTDL
ALLVRQGNSF EVTAIAEGFT PDEIRALTPI DITFAQSLEV M
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